[gradsusr] A "sh: line 1: 2386 Abort trap: 6" termination process using Bundle opengrads 2.2.1 in Macos

Mon Apr 22 05:51:14 EDT 2019

Hi Arlindo.
Yes, I have installed the opengrads bundle file in my folder /opt/opengrads
Now I have run the ./opengrads directly from the folder and have the same
error message, as you can see pasted below.
Edu.

MacBook-Pro-de-Eduardo:~ eduardoagostascarel$
/opt/opengrads/Contents/opengrads ; exit;

              Welcome to the OpenGrADS Bundle Distribution

              --------------------------------------------

For additional information enter "opengrads --manual".

Starting "(/usr/bin/env
DYLD_LIBRARY_PATH=/opt/opengrads/Contents/Darwin/Versions/2.2.1.oga.1/i386/gex:
/opt/opengrads/Contents/Darwin/Versions/2.2.1.oga.1/i386/grads -HC 1 ) " ...

Grid Analysis and Display System (GrADS) Version 2.2.1.oga.1

Copyright (C) 1988-2018 by George Mason University

GrADS comes with ABSOLUTELY NO WARRANTY

See file COPYRIGHT for more information

Config: v2.2.1.oga.1 little-endian readline grib2 netcdf hdf4-sds hdf5
opendap-grids,stn athena geotiff shapefile

Issue 'q config' and 'q gxconfig' commands for more detailed configuration
information

Loading User Defined Extensions table
</opt/opengrads/Contents/Darwin/Versions/2.2.1.oga.1/i386/gex/udxt> ... ok.

Landscape mode? ('n' for portrait):

GX Package Initialization: Size = 11 8.5

Command line history in /Users/eduardoagostascarel/.grads.log

ga-> sdfopen /Volumes/Seagate/Datos/Miscelanea/uwnd.mon.anomaly.nc

Scanning self-describing file:  /Volumes/Seagate/Datos/Miscelanea/
uwnd.mon.anomaly.nc

SDF file /Volumes/Seagate/Datos/Miscelanea/uwnd.mon.anomaly.nc is open as
file 1

LON set to 0 360

LAT set to -90 90

LEV set to 1000 1000

Time values set: 1958:1:1:0 1958:1:1:0

E set to 1 1

ga-> sdfopen /Volumes/Seagate/Datos/Miscelanea/vwnd.mon.anomaly.nc

Scanning self-describing file:  /Volumes/Seagate/Datos/Miscelanea/
vwnd.mon.anomaly.nc

SDF file /Volumes/Seagate/Datos/Miscelanea/vwnd.mon.anomaly.nc is open as
file 2

ga-> set t 100

Time values set: 1966:4:1:0 1966:4:1:0

ga-> d uwnda

Contouring: -8 to 6 interval 2

ga-> d vwnda.2

Contouring: -7 to 7 interval 1

ga-> define chi=fish_chi(uwnda,vwdna.2)

sh: line 1:  1014 Abort trap: 6           ( /usr/bin/env
DYLD_LIBRARY_PATH=/opt/opengrads/Contents/Darwin/Versions/2.2.1.oga.1/i386/gex:
/opt/opengrads/Contents/Darwin/Versions/2.2.1.oga.1/i386/grads -HC 1 )

logout

Saving session...

...copying shared history...

...saving history...truncating history files...

...completed.

[Proceso completado]

El lun., 22 abr. 2019 a las 6:07, Arlindo da Silva (<dasilva at alum.mit.edu>)
escribió:

> Eduardo,
>
>    Are you sure that you are running what you have downloaded? Go to a
> temporary directory,
>
> % tar xvfz /path/to/bundletarball.tgz
> % cd opengrads-2.2.1/Contents
> % ./opengrads
>
> Arlindo
>
>
> On Thu, Apr 18, 2019 at 3:40 AM Eduardo Agosta Scarel <
> eduardo.agosta at gmail.com> wrote:
>
>> Hi Arlindo.
>> I downloaded your bundle file from the link provided, and installed Grads
>> in my Mac book-pro.
>> Unfortunately it sill produces the same error massage that I copy here
>> below.
>> Thanks for your help.
>> Eduardo.
>>
>> For additional information enter "grads --manual".
>>
>>
>> Starting "(/usr/bin/env
>> DYLD_LIBRARY_PATH=/opt/opengrads/Contents/Darwin/Versions/2.2.1.oga.1/i386/gex:
>> /opt/opengrads/Contents/Darwin/Versions/2.2.1.oga.1/i386/grads  ) " ...
>>
>>
>>
>> Grid Analysis and Display System (GrADS) Version 2.2.1.oga.1
>>
>> Copyright (C) 1988-2018 by George Mason University
>>
>> GrADS comes with ABSOLUTELY NO WARRANTY
>>
>> See file COPYRIGHT for more information
>>
>>
>> Config: v2.2.1.oga.1 little-endian readline grib2 netcdf hdf4-sds hdf5
>> opendap-grids,stn athena geotiff shapefile
>>
>> Issue 'q config' and 'q gxconfig' commands for more detailed
>> configuration information
>>
>> Loading User Defined Extensions table
>> </opt/opengrads/Contents/Darwin/Versions/2.2.1.oga.1/i386/gex/udxt> ... ok.
>>
>> Landscape mode? ('n' for portrait):
>>
>> GX Package Initialization: Size = 11 8.5
>>
>> ga-> sdfopen /Volumes/Seagate/Datos/Miscelanea/uwnd.mon.anomaly.nc
>>
>> Scanning self-describing file:  /Volumes/Seagate/Datos/Miscelanea/
>> uwnd.mon.anomaly.nc
>>
>> SDF file /Volumes/Seagate/Datos/Miscelanea/uwnd.mon.anomaly.nc is open
>> as file 1
>>
>> LON set to 0 360
>>
>> LAT set to -90 90
>>
>> LEV set to 1000 1000
>>
>> Time values set: 1958:1:1:0 1958:1:1:0
>>
>> E set to 1 1
>>
>> ga-> sdfopen /Volumes/Seagate/Datos/Miscelanea/vwnd.mon.anomaly.nc
>>
>> Scanning self-describing file:  /Volumes/Seagate/Datos/Miscelanea/
>> vwnd.mon.anomaly.nc
>>
>> SDF file /Volumes/Seagate/Datos/Miscelanea/vwnd.mon.anomaly.nc is open
>> as file 2
>>
>> ga-> set t 100
>>
>> Time values set: 1966:4:1:0 1966:4:1:0
>>
>> ga-> d uwnda
>>
>> Contouring: -8 to 6 interval 2
>>
>> ga-> d vwnda.2
>>
>> Contouring: -7 to 7 interval 1
>>
>> ga-> define chi=fish_chi(uwnda,vwnda.2)
>>
>> sh: line 1:   604 Abort trap: 6           ( /usr/bin/env
>> DYLD_LIBRARY_PATH=/opt/opengrads/Contents/Darwin/Versions/2.2.1.oga.1/i386/gex:
>> /opt/opengrads/Contents/Darwin/Versions/2.2.1.oga.1/i386/grads )
>>
>> logout
>>
>> Saving session...
>>
>> ...copying shared history...
>>
>> ...saving history...truncating history files...
>>
>> ...completed.
>>
>>
>> [Proceso completado]
>>
>>
>> El lun., 15 abr. 2019 a las 13:44, Eduardo Agosta Scarel (<
>> eduardo.agosta at gmail.com>) escribió:
>>
>>> Certainly, Arlindo.
>>> I will try it today and will keep you informed.
>>> Edu.
>>>
>>> Descarga Outlook para iOS <https://aka.ms/o0ukef>
>>>
>>> ------------------------------
>>> *De:* gradsusr <gradsusr-bounces at gradsusr.org> en nombre de Arlindo da
>>> Silva <dasilva at alum.mit.edu>
>>> *Enviado:* lunes, abril 15, 2019 1:54 a. m.
>>> *Para:* GrADS Users Forum
>>> *Asunto:* Re: [gradsusr] A "sh: line 1: 2386 Abort trap: 6" termination
>>> process using Bundle opengrads 2.2.1 in Macos
>>>
>>> Dear Eduardo,
>>>
>>> I was finally able to reproduce your problem. I have no problem on my
>>> Mojave laptop, but found a mac pro which showed exactly what you report.  I
>>> have a new build that seems to solve the problem, but I need beta testers
>>> before I upload this to sf.net. Can you and others running Mojave try
>>> this build?
>>>
>>>
>>> https://www.dropbox.com/s/slahg2lu4kx49ro/opengrads-2.2.1.oga.1-bundle-x86_64-apple-darwin18.5.0.tar.gz?dl=1
>>>
>>> (This is the standard bundle tarball, I'll create a pkg once I confirm
>>> this works.)  Please post your results to this list, do not email me
>>> directly.
>>>
>>>    Thanks,
>>>
>>>       Arlindo
>>>
>>>
>>>
>>>
>>>
>>> On Wed, Mar 27, 2019 at 5:15 AM Eduardo Agosta Scarel <
>>> eduardo.agosta at gmail.com> wrote:
>>>
>>>> Dear Grads Users
>>>> I am facing the problem while trying to use fish-based functions under
>>>> the Opengrads 2.2.1 bundle version for Macos.
>>>> Below you will see the error message. Have you any suggestions how to
>>>> solve it?
>>>> Thanks.
>>>>
>>>> ga-> q file
>>>>
>>>> File 1 :
>>>>
>>>>   Descriptor: /Volumes/Seagate/Datos/ERA_interim/Diario/12UTC/
>>>> u.v.300_79-18.nc
>>>>
>>>>   Binary: /Volumes/Seagate/Datos/ERA_interim/Diario/12UTC/
>>>> u.v.300_79-18.nc
>>>>
>>>>   Type = Gridded
>>>>
>>>>   Xsize = 480  Ysize = 241  Zsize = 1  Tsize = 14610  Esize = 1
>>>>
>>>>   Number of Variables = 2
>>>>
>>>>      u  0  t,y,x  U component of wind
>>>>
>>>>      v  0  t,y,x  V component of wind
>>>>
>>>> ga-> y=fish_psi(u,v)
>>>>
>>>> sh: line 1:  2386 Abort trap: 6           ( /usr/bin/env
>>>> DYLD_LIBRARY_PATH=/Applications/OpenGrADS/Darwin/Versions/2.2.1.oga.1/i386/gex:
>>>> /Applications/OpenGrADS/Darwin/Versions/2.2.1.oga.1/i386/grads -HC 1 )
>>>>
>>>> MacBook-Pro-de-Eduardo:~ eduardoagostascarel$
>>>> --
>>>> Eduardo Agosta Scarel
>>>> www.linkedin.com/in/eduardo-agosta-scarel
>>>>
>>>> "The Carmelite NGO is a way to promote justice, peace and care for
>>>> creation"
>>>> "La ONG Carmelita es una manera de promover la justicia, la paz y el
>>>> cuidado de la creación"
>>>> *http://carmelitengo.org/ <http://carmelitengo.org/>*
>>>> Promote Laudato Si' - Promueve Laudato Si´
>>>> https://www.laudato-si-for-all.com/
>>>>
>>>> _______________________________________________
>>>> gradsusr mailing list
>>>> gradsusr at gradsusr.org
>>>> http://gradsusr.org/mailman/listinfo/gradsusr
>>>>
>>>
>>>
>>> --
>>> Arlindo da Silva
>>> *dasilva at alum.mit.edu <dasilva at alum.mit.edu>*
>>>
>>
>>
>> --
>> Eduardo Agosta Scarel
>> www.linkedin.com/in/eduardo-agosta-scarel
>>
>> "The Carmelite NGO is a way to promote justice, peace and care for
>> creation"
>> "La ONG Carmelita es una manera de promover la justicia, la paz y el
>> cuidado de la creación"
>> *http://carmelitengo.org/ <http://carmelitengo.org/>*
>> Promote Laudato Si' - Promueve Laudato Si´
>> https://www.laudato-si-for-all.com/
>>
>> _______________________________________________
>> gradsusr mailing list
>> gradsusr at gradsusr.org
>> http://gradsusr.org/mailman/listinfo/gradsusr
>>
> --
> Arlindo da Silva
> *dasilva at alum.mit.edu <dasilva at alum.mit.edu>*
> _______________________________________________
> gradsusr mailing list
> gradsusr at gradsusr.org
> http://gradsusr.org/mailman/listinfo/gradsusr
>

-- 
Eduardo Agosta Scarel
www.linkedin.com/in/eduardo-agosta-scarel

"The Carmelite NGO is a way to promote justice, peace and care for creation"
"La ONG Carmelita es una manera de promover la justicia, la paz y el
cuidado de la creación"
*http://carmelitengo.org/ <http://carmelitengo.org/>*
Promote Laudato Si' - Promueve Laudato Si´
https://www.laudato-si-for-all.com/
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