[gradsusr] Writing .ctl file
David Stanfel
dstanfel at ualberta.ca
Tue Jul 29 13:59:10 EDT 2014
I don't see any .xml files. In the executable folder there are only .x and
.o files from compiling the source code. The MOM_run.csh uses these files.
I have never used frerun or frepp.
Thanks,
David
On Tue, Jul 29, 2014 at 10:24 AM, Charles Seman - NOAA Federal <
charles.seman at noaa.gov> wrote:
> David,
>
> Where did these two runscripts come from? How did you make them? Is
> there an xml file? Did you use frerun? At GFDL, frerun + xml file
> makes the job runscript, and the job runscript launches post-processing
> also, depending on how the xml file is configured. I don't understand
> why your model runscript doesn't do this as well. There is also a frepp
> utility that can be used with the xml file after a run completes to make
> a post-processing jobscript to do the regridding. It seems you have a
> different system in place to run the model, and based on this, I would
> advise contacting your modeling services department for further help
> with this issue.
>
> I hope this helps,
> Chuck
>
> On 07/28/2014 07:52 PM, David Stanfel wrote:
> > Hello,
> >
> > I actually ran it on a westgrid system as a batch job with the command:
> >
> > qsub -l procs=90,pmem=2000mb,walltime=01:00:00 run_MOM_solo.pbs
> >
> >
> > The file run_MOM_solo.pbs is attached as well as the MOM_run.csh file
> > that it calls.
> >
> >
> > Thanks,
> >
> >
> > David
> >
> >
> >
> > On Mon, Jul 28, 2014 at 1:25 PM, Charles Seman - NOAA Federal
> > <charles.seman at noaa.gov <mailto:charles.seman at noaa.gov>> wrote:
> >
> > David,
> >
> > How did you get the data? Did you run the GFDL model locally? If
> so,
> > did you use "frerun" with an xml file? If so, there is a companion
> > "frepp" command which can be used to post-process the history data.
> > Could you provide more details on the source of your file?
> >
> > Thanks,
> > Chuck
> >
> > On 07/26/2014 07:38 PM, David Stanfel wrote:
> > > It is GFDL Model data using the Molecular Ocean Model MOM_solo
> type.
> > > This is for the box1 test case. I did try sdfopen and it came out
> > with
> > > the following error message:
> > >
> > > Scanning self-describing file: 19800101.ocean_neutral.nc
> > <http://19800101.ocean_neutral.nc>
> > > <http://19800101.ocean_neutral.nc>
> > >
> > > SDF Error: 365 day calendars are no longer supported by sdfopen.
> > >
> > > To open this file with GrADS, use a descriptor file with
> > >
> > > a complete TDEF entry and OPTIONS 365_day_calendar.
> > >
> > >
> > > I do not have any pp data and I don't know how to go about
> > creating the
> > > grid data. How could I do that, putting it into lat, long
> > coordinates?
> > >
> > > Thanks,
> > >
> > > David
> > >
> > >
> > > On Fri, Jul 25, 2014 at 2:39 PM, Charles Seman - NOAA Federal
> > > <charles.seman at noaa.gov <mailto:charles.seman at noaa.gov>
> > <mailto:charles.seman at noaa.gov <mailto:charles.seman at noaa.gov>>>
> wrote:
> > >
> > > David,
> > >
> > > This file looks like it's from a GFDL model? Based on the
> > names of the
> > > coordinates, and the global attributes "grid_type" and
> > "grid_tile", it
> > > looks like it is a "history" file which is on the model grid
> > and has yet
> > > to be regridded to a lat/lon grid. I'm not a user of the
> > ocean data,
> > > but am working with a GFDL history data file from the
> > atmospheric model
> > > on the cubed-sphere model grid tile4. Be very careful! The
> grid
> > > coordinates xt_ocean and yt_ocean may need to be mapped into
> > actual
> > > global coordinates. To get a view of the data, have you
> > tried opening
> > > the file in GrADS without using a GrADS ctl file? GrADS is
> > able to open
> > > and view the tile4 file I'm working with, but one must be
> > aware that the
> > > map background that GrADS assigns is not physically correct.
> > Can you
> > > use post-processed "pp" data (if you have this, it should be
> > in a "pp"
> > > subdirectory)? These "pp" data have been put on a physical
> grid.
> > > I talked with someone here at GFDL who works with ocean data,
> > and he
> > > says Ferret is able to open the datasets he works with...
> > >
> > > Here's an example of what's in a pp/ocean/ocean.static.nc
> > <http://ocean.static.nc>
> > > <http://ocean.static.nc> file. Note
> > > how the tracer latitude and longitudes are functions of
> > > yt_ocean,xt_ocean: geolat_t(yt_ocean,xt_ocean) and
> > > geolon_t(yt_ocean,xt_ocean). So the lat and lon are
> themselves
> > > functions of grid coordinate variables. Here's an example of
> > > two-dimensional lat, lon coordinates:
> > >
> >
> http://cfconventions.org/Data/cf-convetions/cf-conventions-1.6/build/cf-conventions.html#idp5559280
> > >
> > > netcdf ocean.static {
> > >
> > > dimensions:
> > >
> > > xu_ocean = 360 ;
> > >
> > > yu_ocean = 200 ;
> > >
> > > xt_ocean = 360 ;
> > >
> > > yt_ocean = 200 ;
> > >
> > > variables:
> > >
> > > double xt_ocean(xt_ocean) ;
> > >
> > > xt_ocean:long_name = "tcell longitude" ;
> > >
> > > xt_ocean:units = "degrees_E" ;
> > >
> > > xt_ocean:cartesian_axis = "X" ;
> > >
> > > double yt_ocean(yt_ocean) ;
> > >
> > > yt_ocean:long_name = "tcell latitude" ;
> > >
> > > yt_ocean:units = "degrees_N" ;
> > >
> > > yt_ocean:cartesian_axis = "Y" ;
> > >
> > > double xu_ocean(xu_ocean) ;
> > >
> > > xu_ocean:long_name = "ucell longitude" ;
> > >
> > > xu_ocean:units = "degrees_E" ;
> > >
> > > xu_ocean:cartesian_axis = "X" ;
> > >
> > > double yu_ocean(yu_ocean) ;
> > >
> > > yu_ocean:long_name = "ucell latitude" ;
> > >
> > > yu_ocean:units = "degrees_N" ;
> > >
> > > yu_ocean:cartesian_axis = "Y" ;
> > >
> > > float ht(yt_ocean, xt_ocean) ;
> > >
> > > ht:long_name = "ocean depth on t-cells" ;
> > >
> > > ht:units = "m" ;
> > >
> > > ht:valid_range = -1.e+09f, 1.e+09f ;
> > >
> > > ht:missing_value = -1.e+20f ;
> > >
> > > ht:_FillValue = -1.e+20f ;
> > >
> > > ht:cell_methods = "time: point" ;
> > >
> > > ht:coordinates = "geolon_t geolat_t" ;
> > >
> > > ht:standard_name =
> > "sea_floor_depth_below_geoid" ;
> > >
> > > float hu(yu_ocean, xu_ocean) ;
> > >
> > > hu:long_name = "ocean depth on u-cells" ;
> > >
> > > hu:units = "m" ;
> > >
> > > hu:valid_range = -1.e+09f, 1.e+09f ;
> > >
> > > hu:missing_value = -1.e+20f ;
> > >
> > > hu:_FillValue = -1.e+20f ;
> > >
> > > hu:cell_methods = "time: point" ;
> > >
> > > hu:coordinates = "geolon_c geolat_c" ;
> > >
> > > float geolat_c(yu_ocean, xu_ocean) ;
> > >
> > > geolat_c:long_name = "uv latitude" ;
> > >
> > > geolat_c:units = "degrees_N" ;
> > >
> > > geolat_c:valid_range = -91.f, 91.f ;
> > >
> > > geolat_c:missing_value = 1.e+20f ;
> > >
> > > geolat_c:_FillValue = 1.e+20f ;
> > >
> > > geolat_c:cell_methods = "time: point" ;
> > >
> > > geolat_c:coordinates = "geolon_c geolat_c" ;
> > >
> > > float geolon_c(yu_ocean, xu_ocean) ;
> > >
> > > geolon_c:long_name = "uv longitude" ;
> > >
> > > geolon_c:units = "degrees_E" ;
> > >
> > > geolon_c:valid_range = -281.f, 361.f ;
> > >
> > > geolon_c:missing_value = 1.e+20f ;
> > >
> > > geolon_c:_FillValue = 1.e+20f ;
> > >
> > > geolon_c:cell_methods = "time: point" ;
> > >
> > > geolon_c:coordinates = "geolon_c geolat_c" ;
> > >
> > > float geolat_t(yt_ocean, xt_ocean) ;
> > >
> > > geolat_t:long_name = "tracer latitude" ;
> > >
> > > geolat_t:units = "degrees_N" ;
> > >
> > > geolat_t:valid_range = -91.f, 91.f ;
> > >
> > > geolat_t:missing_value = 1.e+20f ;
> > >
> > > geolat_t:_FillValue = 1.e+20f ;
> > >
> > > geolat_t:cell_methods = "time: point" ;
> > >
> > > geolat_t:coordinates = "geolon_t geolat_t" ;
> > >
> > > float geolon_t(yt_ocean, xt_ocean) ;
> > >
> > > geolon_t:long_name = "tracer longitude" ;
> > >
> > > geolon_t:units = "degrees_E" ;
> > >
> > > geolon_t:valid_range = -281.f, 361.f ;
> > >
> > > geolon_t:missing_value = 1.e+20f ;
> > >
> > > geolon_t:_FillValue = 1.e+20f ;
> > >
> > > geolon_t:cell_methods = "time: point" ;
> > >
> > > geolon_t:coordinates = "geolon_t geolat_t" ;
> > >
> > > float area_t(yt_ocean, xt_ocean) ;
> > >
> > > area_t:long_name = "tracer cell area" ;
> > >
> > > area_t:units = "m^2" ;
> > >
> > > area_t:valid_range = 0.f, 1.e+15f ;
> > >
> > > area_t:missing_value = 1.e+20f ;
> > >
> > > area_t:_FillValue = 1.e+20f ;
> > >
> > > area_t:cell_methods = "time: point" ;
> > >
> > > area_t:coordinates = "geolon_t geolat_t" ;
> > >
> > > float area_u(yu_ocean, xu_ocean) ;
> > >
> > > area_u:long_name = "velocity cell area" ;
> > >
> > > area_u:units = "m^2" ;
> > >
> > > area_u:valid_range = 0.f, 1.e+15f ;
> > >
> > > area_u:missing_value = 1.e+20f ;
> > >
> > > area_u:_FillValue = 1.e+20f ;
> > >
> > > area_u:cell_methods = "time: point" ;
> > >
> > > area_u:coordinates = "geolon_c geolat_c" ;
> > >
> > > float kmt(yt_ocean, xt_ocean) ;
> > >
> > > kmt:long_name = "number of depth levels on
> > t-grid" ;
> > >
> > > kmt:units = "dimensionless" ;
> > >
> > > kmt:valid_range = -10.f, 1.e+09f ;
> > >
> > > kmt:missing_value = -1.e+20f ;
> > >
> > > kmt:_FillValue = -1.e+20f ;
> > >
> > > kmt:cell_methods = "time: point" ;
> > >
> > > kmt:coordinates = "geolon_t geolat_t" ;
> > >
> > > float kmu(yu_ocean, xu_ocean) ;
> > >
> > > kmu:long_name = "number of depth levels on
> > u-grid" ;
> > >
> > > kmu:units = "dimensionless" ;
> > >
> > > kmu:valid_range = -10.f, 1.e+09f ;
> > >
> > > kmu:missing_value = -1.e+20f ;
> > >
> > > kmu:_FillValue = -1.e+20f ;
> > >
> > > kmu:cell_methods = "time: point" ;
> > >
> > > kmu:coordinates = "geolon_c geolat_c" ;
> > >
> > > float geo_heat(yt_ocean, xt_ocean) ;
> > >
> > > geo_heat:long_name = "Geothermal heating" ;
> > >
> > > geo_heat:units = "W/m^2" ;
> > >
> > > geo_heat:valid_range = -10.f, 1000000.f ;
> > >
> > > geo_heat:missing_value = -1.e+20f ;
> > >
> > > geo_heat:_FillValue = -1.e+20f ;
> > >
> > > geo_heat:cell_methods = "time: point" ;
> > >
> > > geo_heat:coordinates = "geolon_t geolat_t" ;
> > >
> > > geo_heat:standard_name =
> > > "upward_geothermal_heat_flux_at_sea_floor" ;
> > >
> > > float pbot0(yt_ocean, xt_ocean) ;
> > >
> > > pbot0:long_name = "reference bottom pressure
> > > t-cells" ;
> > >
> > > pbot0:units = "dbar" ;
> > >
> > > pbot0:valid_range = -1.e+08f, 1.e+08f ;
> > > pbot0:missing_value = -1.e+20f ;
> > > pbot0:_FillValue = -1.e+20f ;
> > > pbot0:cell_methods = "time: point" ;
> > > pbot0:coordinates = "geolon_t geolat_t" ;
> > >
> > > // global attributes:
> > > :NCX = "1.1.1" ;
> > > }
> > >
> > > I hope this is helpful. I don't think I can be of much more
> > help, but
> > > hope this points you in the right direction.
> > >
> > > Chuck
> > >
> > > On 07/25/2014 12:26 AM, David Stanfel wrote:
> > > > Hello,
> > > >
> > > > I decided to try a different file. Here is the ncdump -c
> > of said
> > > file:
> > > >
> > > > dstanfel:bin ninjawarrior343$ ncdump -c
> > 19800101.ocean_neutral.nc <http://19800101.ocean_neutral.nc>
> > > <http://19800101.ocean_neutral.nc>
> > > > <http://19800101.ocean_neutral.nc>
> > > >
> > > > netcdf \19800101.ocean_neutral {
> > > >
> > > > dimensions:
> > > >
> > > > xt_ocean = 24 ;
> > > >
> > > > yt_ocean = 35 ;
> > > >
> > > > Time = UNLIMITED ; // (1 currently)
> > > >
> > > > nv = 2 ;
> > > >
> > > > st_ocean = 18 ;
> > > >
> > > > st_edges_ocean = 19 ;
> > > >
> > > > variables:
> > > >
> > > > double xt_ocean(xt_ocean) ;
> > > >
> > > > xt_ocean:long_name = "tcell longitude" ;
> > > >
> > > > xt_ocean:units = "degrees_E" ;
> > > >
> > > > xt_ocean:cartesian_axis = "X" ;
> > > >
> > > > double yt_ocean(yt_ocean) ;
> > > >
> > > > yt_ocean:long_name = "tcell latitude" ;
> > > >
> > > > yt_ocean:units = "degrees_N" ;
> > > >
> > > > yt_ocean:cartesian_axis = "Y" ;
> > > >
> > > > double Time(Time) ;
> > > >
> > > > Time:long_name = "Time" ;
> > > >
> > > > Time:units = "days since 1980-01-01 00:00:00" ;
> > > >
> > > > Time:cartesian_axis = "T" ;
> > > >
> > > > Time:calendar_type = "NOLEAP" ;
> > > >
> > > > Time:calendar = "NOLEAP" ;
> > > >
> > > > Time:bounds = "Time_bounds" ;
> > > >
> > > > double nv(nv) ;
> > > >
> > > > nv:long_name = "vertex number" ;
> > > >
> > > > nv:units = "none" ;
> > > >
> > > > nv:cartesian_axis = "N" ;
> > > >
> > > > double st_ocean(st_ocean) ;
> > > >
> > > > st_ocean:long_name = "tcell pstar" ;
> > > >
> > > > st_ocean:units = "dbars" ;
> > > >
> > > > st_ocean:cartesian_axis = "Z" ;
> > > >
> > > > st_ocean:positive = "down" ;
> > > >
> > > > st_ocean:edges = "st_edges_ocean" ;
> > > >
> > > > double st_edges_ocean(st_edges_ocean) ;
> > > >
> > > > st_edges_ocean:long_name = "tcell pstar edges" ;
> > > >
> > > > st_edges_ocean:units = "dbars" ;
> > > >
> > > > st_edges_ocean:cartesian_axis = "Z" ;
> > > >
> > > > st_edges_ocean:positive = "down" ;
> > > >
> > > > float agm(Time, yt_ocean, xt_ocean) ;
> > > >
> > > > agm:long_name = "GM diffusivity at surface" ;
> > > >
> > > > agm:units = "m^2/sec" ;
> > > >
> > > > agm:valid_range = -10.f, 1.e+10f ;
> > > >
> > > > agm:missing_value = -1.e+20f ;
> > > >
> > > > agm:_FillValue = -1.e+20f ;
> > > >
> > > > agm:cell_methods = "time: mean" ;
> > > >
> > > > agm:time_avg_info = "average_T1,average_T2,average_DT" ;
> > > >
> > > > agm:coordinates = "geolon_t geolat_t" ;
> > > >
> > > > agm:standard_name =
> > "ocean_tracer_bolus_laplacian_diffusivity" ;
> > > >
> > > > float rossby(Time, yt_ocean, xt_ocean) ;
> > > >
> > > > rossby:long_name = "Rossby radius used in neutral physics"
> ;
> > > >
> > > > rossby:units = "m" ;
> > > >
> > > > rossby:valid_range = -10.f, 1.e+10f ;
> > > >
> > > > rossby:missing_value = -1.e+20f ;
> > > >
> > > > rossby:_FillValue = -1.e+20f ;
> > > >
> > > > rossby:cell_methods = "time: mean" ;
> > > >
> > > > rossby:time_avg_info = "average_T1,average_T2,average_DT" ;
> > > >
> > > > rossby:coordinates = "geolon_t geolat_t" ;
> > > >
> > > > float slope31(Time, st_ocean, yt_ocean, xt_ocean) ;
> > > >
> > > > slope31:long_name = "neutral slope -(rho_x/rho_z)" ;
> > > >
> > > > slope31:units = "dimensionless" ;
> > > >
> > > > slope31:valid_range = -1.e+10f, 1.e+10f ;
> > > >
> > > > slope31:missing_value = -1.e+20f ;
> > > >
> > > > slope31:_FillValue = -1.e+20f ;
> > > >
> > > > slope31:cell_methods = "time: mean" ;
> > > >
> > > > slope31:time_avg_info = "average_T1,average_T2,average_DT"
> ;
> > > >
> > > > slope31:coordinates = "geolon_t geolat_t" ;
> > > >
> > > > float slope32(Time, st_ocean, yt_ocean, xt_ocean) ;
> > > >
> > > > slope32:long_name = "neutral slope -(rho_y/rho_z)" ;
> > > >
> > > > slope32:units = "dimensionless" ;
> > > >
> > > > slope32:valid_range = -1.e+10f, 1.e+10f ;
> > > >
> > > > slope32:missing_value = -1.e+20f ;
> > > >
> > > > slope32:_FillValue = -1.e+20f ;
> > > >
> > > > slope32:cell_methods = "time: mean" ;
> > > >
> > > > slope32:time_avg_info = "average_T1,average_T2,average_DT"
> ;
> > > >
> > > > slope32:coordinates = "geolon_t geolat_t" ;
> > > >
> > > > double average_T1(Time) ;
> > > >
> > > > average_T1:long_name = "Start time for average period" ;
> > > >
> > > > average_T1:units = "days since 1980-01-01 00:00:00" ;
> > > >
> > > > average_T1:missing_value = 1.e+20 ;
> > > >
> > > > average_T1:_FillValue = 1.e+20 ;
> > > >
> > > > double average_T2(Time) ;
> > > >
> > > > average_T2:long_name = "End time for average period" ;
> > > >
> > > > average_T2:units = "days since 1980-01-01 00:00:00" ;
> > > >
> > > > average_T2:missing_value = 1.e+20 ;
> > > >
> > > > average_T2:_FillValue = 1.e+20 ;
> > > >
> > > > double average_DT(Time) ;
> > > >
> > > > average_DT:long_name = "Length of average period" ;
> > > >
> > > > average_DT:units = "days" ;
> > > >
> > > > average_DT:missing_value = 1.e+20 ;
> > > >
> > > > average_DT:_FillValue = 1.e+20 ;
> > > >
> > > > double Time_bounds(Time, nv) ;
> > > >
> > > > Time_bounds:long_name = "Time axis boundaries" ;
> > > >
> > > > Time_bounds:units = "days" ;
> > > >
> > > > Time_bounds:missing_value = 1.e+20 ;
> > > >
> > > > Time_bounds:_FillValue = 1.e+20 ;
> > > >
> > > >
> > > > // global attributes:
> > > >
> > > > :filename = "ocean_neutral.nc <http://ocean_neutral.nc>
> > <http://ocean_neutral.nc>
> > > <http://ocean_neutral.nc>" ;
> > > >
> > > > :title = "MOM4 box" ;
> > > >
> > > > :grid_type = "regular" ;
> > > >
> > > > :grid_tile = "N/A" ;
> > > >
> > > > data:
> > > >
> > > >
> > > > xt_ocean = 1.25, 3.75, 6.25, 8.75, 11.25, 13.75, 16.25,
> > 18.75,
> > > 21.25,
> > > > 23.75,
> > > >
> > > > 26.25, 28.75, 31.25, 33.75, 36.25, 38.75, 41.25,
> 43.75,
> > > 46.25, 48.75,
> > > >
> > > > 51.25, 53.75, 56.25, 58.75 ;
> > > >
> > > >
> > > > yt_ocean = 1.25, 3.7488100528717, 6.2393012046814,
> > > 8.71919345855713,
> > > >
> > > > 11.1815176010132, 13.6242818832397, 16.0408229827881,
> > > > 18.4296073913574,
> > > >
> > > > 20.784387588501, 23.1042194366455, 25.3833503723145,
> > > 27.6215190887451,
> > > >
> > > > 29.813497543335, 31.9597606658936, 34.0555992126465,
> > > 36.1022338867188,
> > > >
> > > > 38.0954322814941, 40.0371551513672, 41.9235687255859,
> > > > 43.7573394775391,
> > > >
> > > > 45.5349464416504, 47.259708404541, 48.9283294677734,
> > > 50.5447235107422,
> > > >
> > > > 52.1057090759277, 53.6157531738281, 55.0716934204102,
> > > > 56.4785079956055,
> > > >
> > > > 57.8329429626465, 59.1404571533203, 60.3976211547852,
> > > > 61.6103477478027,
> > > >
> > > > 62.7749481201172, 63.8977813720703, 64.9748153686523 ;
> > > >
> > > >
> > > > Time = 2 ;
> > > >
> > > >
> > > > nv = 1, 2 ;
> > > >
> > > >
> > > > st_ocean = 17.75025, 53.25075, 88.75125, 124.25175,
> > 159.75225,
> > > 195.25275,
> > > >
> > > > 230.75325, 266.25375, 314.34159289856,
> 399.171716592407,
> > > >
> > > > 541.922400494385, 759.079548358154, 1061.10117883301,
> > > > 1451.56990550537,
> > > >
> > > > 1926.90292906494, 2476.64250944824, 3084.30280480957,
> > > > 3728.70522619629 ;
> > > >
> > > >
> > > > st_edges_ocean = 0, 35.5005, 71.001, 106.5015, 142.002,
> > 177.5025,
> > > > 213.003,
> > > >
> > > > 248.5035, 290.29765597229, 356.756654745483,
> > 470.547043066406,
> > > >
> > > > 650.50097442627, 910.090332641602, 1256.33548026123,
> > > 1689.23641728516,
> > > >
> > > > 2201.77290498047, 2780.47265712891, 3406.50401550293,
> > > 4057.20024763184
> > > >
> > > >
> > > > I wrote a .ctl file:
> > > >
> > > >
> > > > DSET ^19800101.ocean_neutral.nc
> > <http://19800101.ocean_neutral.nc>
> > > <http://19800101.ocean_neutral.nc>
> > <http://19800101.ocean_neutral.nc>
> > > >
> > > > UNDEF -9.99e8 missing_value
> > > >
> > > > DTYPE netcdf
> > > >
> > > > CACHESIZE 100000
> > > >
> > > > TITLE Sample Model Output
> > > >
> > > > XDEF 24 LINEAR 1.25 2.5
> > > >
> > > > YDEF 35 levels 1.25, 3.7488100528717, 6.2393012046814,
> > > 8.71919345855713,
> > > >
> > > > 11.1815176010132, 13.6242818832397, 16.0408229827881,
> > > > 18.4296073913574,
> > > >
> > > > 20.784387588501, 23.1042194366455, 25.3833503723145,
> > > 27.6215190887451,
> > > >
> > > > 29.813497543335, 31.9597606658936, 34.0555992126465,
> > > 36.1022338867188,
> > > >
> > > > 38.0954322814941, 40.0371551513672, 41.9235687255859,
> > > > 43.7573394775391,
> > > >
> > > > 45.5349464416504, 47.259708404541, 48.9283294677734,
> > > 50.5447235107422,
> > > >
> > > > 52.1057090759277, 53.6157531738281, 55.0716934204102,
> > > > 56.4785079956055,
> > > >
> > > > 57.8329429626465, 59.1404571533203, 60.3976211547852,
> > > > 61.6103477478027,
> > > >
> > > > 62.7749481201172, 63.8977813720703, 64.9748153686523
> > > >
> > > > ZDEF 18 levels 17.75025, 53.25075, 88.75125, 124.25175,
> > 159.75225,
> > > > 195.25275, 230.75327, 266.25375, 314.34159289856,
> > 399.171716592407,
> > > > 541.922400494385, 759.079548358154, 1061.10117883301,
> > > 1451.56990550537,
> > > > 1926.90292906494, 2476.64250944824, 3084.30280480957,
> > > 3728.70522619629
> > > >
> > > > TDEF 1 LINEAR 01JAN0001 1mo
> > > >
> > > > VARS 4
> > > >
> > > > agm 0 t,y,x GM diffusivity at surface (m^2/sec)
> > > >
> > > > rossby 0 t,y,x Rossby radius used in neutral physics (m)
> > > >
> > > > slope31 18 t,z,y,x Neutral slope -(rho_x/rho_z)
> > > >
> > > > slope32 18 t,z,y,x Neutral slope -(rho_y/rho_z)
> > > >
> > > > ENDVARS
> > > >
> > > >
> > > > When trying to display the variables, I get this error:
> > > >
> > > >
> > > > ga-> d agm
> > > >
> > > > Cannot contour grid - all undefined values
> > > >
> > > > ga-> d rossby
> > > >
> > > > Cannot contour grid - all undefined values
> > > >
> > > > ga-> d slope31
> > > >
> > > > Cannot contour grid - all undefined values
> > > >
> > > > ga->
> > > >
> > > >
> > > > What could be going wrong here?
> > > >
> > > > Thanks,
> > > >
> > > > David
> > > >
> > > >
> > > > On Wed, Jul 23, 2014 at 11:23 AM, David Stanfel
> > > <dstanfel at ualberta.ca <mailto:dstanfel at ualberta.ca>
> > <mailto:dstanfel at ualberta.ca <mailto:dstanfel at ualberta.ca>>
> > > > <mailto:dstanfel at ualberta.ca <mailto:dstanfel at ualberta.ca>
> > <mailto:dstanfel at ualberta.ca <mailto:dstanfel at ualberta.ca>>>> wrote:
> > > >
> > > > Also, how do you determine the CACHESIZE?
> > > >
> > > > Thanks,
> > > >
> > > > David
> > > >
> > > >
> > > > On Tue, Jul 22, 2014 at 11:05 PM, David Stanfel
> > > > <dstanfel at ualberta.ca <mailto:dstanfel at ualberta.ca>
> > <mailto:dstanfel at ualberta.ca <mailto:dstanfel at ualberta.ca>>
> > > <mailto:dstanfel at ualberta.ca <mailto:dstanfel at ualberta.ca>
> > <mailto:dstanfel at ualberta.ca <mailto:dstanfel at ualberta.ca>>>> wrote:
> > > >
> > > > Hello,
> > > >
> > > > I just ran a climate model which produced some .nc
> > files.
> > > I am
> > > > having trouble writing the .ctl file to read said
> > .nc files.
> > > > Here is the ncdump -c for one of the files I am
> > trying to
> > > read:
> > > >
> > > > dstanfel:bin ninjawarrior343$ ncdump -c
> > > 19800101.ocean_layer.nc <http://19800101.ocean_layer.nc>
> > <http://19800101.ocean_layer.nc>
> > > > <http://19800101.ocean_layer.nc>
> > > >
> > > > netcdf \19800101.ocean_layer {
> > > >
> > > > dimensions:
> > > >
> > > > grid_xt_ocean = 24 ;
> > > >
> > > > grid_yt_ocean = 35 ;
> > > >
> > > > theta = 100 ;
> > > >
> > > > theta_edges = 101 ;
> > > >
> > > > Time = UNLIMITED ; // (1 currently)
> > > >
> > > > nv = 2 ;
> > > >
> > > > xt_ocean = 24 ;
> > > >
> > > > yt_ocean = 35 ;
> > > >
> > > > st_ocean = 18 ;
> > > >
> > > > st_edges_ocean = 19 ;
> > > >
> > > > potrho = 100 ;
> > > >
> > > > potrho_edges = 101 ;
> > > >
> > > > variables:
> > > >
> > > > double grid_xt_ocean(grid_xt_ocean) ;
> > > >
> > > > grid_xt_ocean:long_name = "tcell longitude" ;
> > > >
> > > > grid_xt_ocean:units = "degrees_E" ;
> > > >
> > > > grid_xt_ocean:cartesian_axis = "X" ;
> > > >
> > > > double grid_yt_ocean(grid_yt_ocean) ;
> > > >
> > > > grid_yt_ocean:long_name = "tcell latitude" ;
> > > >
> > > > grid_yt_ocean:units = "degrees_N" ;
> > > >
> > > > grid_yt_ocean:cartesian_axis = "Y" ;
> > > >
> > > > double theta(theta) ;
> > > >
> > > > theta:long_name = "potential or conservative
> > temperature" ;
> > > >
> > > > theta:units = "C" ;
> > > >
> > > > theta:cartesian_axis = "Z" ;
> > > >
> > > > theta:positive = "up" ;
> > > >
> > > > theta:edges = "theta_edges" ;
> > > >
> > > > double theta_edges(theta_edges) ;
> > > >
> > > > theta_edges:long_name = "potential or conservative
> > > temperature
> > > > edges" ;
> > > >
> > > > theta_edges:units = "C" ;
> > > >
> > > > theta_edges:cartesian_axis = "Z" ;
> > > >
> > > > theta_edges:positive = "up" ;
> > > >
> > > > double Time(Time) ;
> > > >
> > > > Time:long_name = "Time" ;
> > > >
> > > > Time:units = "days since 1980-01-01 00:00:00" ;
> > > >
> > > > Time:cartesian_axis = "T" ;
> > > >
> > > > Time:calendar_type = "NOLEAP" ;
> > > >
> > > > Time:calendar = "NOLEAP" ;
> > > >
> > > > Time:bounds = "Time_bounds" ;
> > > >
> > > > double nv(nv) ;
> > > >
> > > > nv:long_name = "vertex number" ;
> > > >
> > > > nv:units = "none" ;
> > > >
> > > > nv:cartesian_axis = "N" ;
> > > >
> > > > double xt_ocean(xt_ocean) ;
> > > >
> > > > xt_ocean:long_name = "tcell longitude" ;
> > > >
> > > > xt_ocean:units = "degrees_E" ;
> > > >
> > > > xt_ocean:cartesian_axis = "X" ;
> > > >
> > > > double yt_ocean(yt_ocean) ;
> > > >
> > > > yt_ocean:long_name = "tcell latitude" ;
> > > >
> > > > yt_ocean:units = "degrees_N" ;
> > > >
> > > > yt_ocean:cartesian_axis = "Y" ;
> > > >
> > > > double st_ocean(st_ocean) ;
> > > >
> > > > st_ocean:long_name = "tcell pstar" ;
> > > >
> > > > st_ocean:units = "dbars" ;
> > > >
> > > > st_ocean:cartesian_axis = "Z" ;
> > > >
> > > > st_ocean:positive = "down" ;
> > > >
> > > > st_ocean:edges = "st_edges_ocean" ;
> > > >
> > > > double st_edges_ocean(st_edges_ocean) ;
> > > >
> > > > st_edges_ocean:long_name = "tcell pstar edges" ;
> > > >
> > > > st_edges_ocean:units = "dbars" ;
> > > >
> > > > st_edges_ocean:cartesian_axis = "Z" ;
> > > >
> > > > st_edges_ocean:positive = "down" ;
> > > >
> > > > double potrho(potrho) ;
> > > >
> > > > potrho:long_name = "potential density" ;
> > > >
> > > > potrho:units = "kg/m^3" ;
> > > >
> > > > potrho:cartesian_axis = "Z" ;
> > > >
> > > > potrho:positive = "down" ;
> > > >
> > > > potrho:edges = "potrho_edges" ;
> > > >
> > > > double potrho_edges(potrho_edges) ;
> > > >
> > > > potrho_edges:long_name = "potential density edges"
> ;
> > > >
> > > > potrho_edges:units = "kg/m^3" ;
> > > >
> > > > potrho_edges:cartesian_axis = "Z" ;
> > > >
> > > > potrho_edges:positive = "down" ;
> > > >
> > > > float depth_of_theta(Time, theta, grid_yt_ocean,
> > > grid_xt_ocean) ;
> > > >
> > > > depth_of_theta:long_name = "depth of potential temp
> > > surface" ;
> > > >
> > > > depth_of_theta:units = "m" ;
> > > >
> > > > depth_of_theta:valid_range = 0.f, 1.e+10f ;
> > > >
> > > > depth_of_theta:missing_value = -1.e+20f ;
> > > >
> > > > depth_of_theta:_FillValue = -1.e+20f ;
> > > >
> > > > depth_of_theta:cell_methods = "time: mean" ;
> > > >
> > > > depth_of_theta:time_avg_info =
> > > "average_T1,average_T2,average_DT" ;
> > > >
> > > > float rho(Time, st_ocean, yt_ocean, xt_ocean) ;
> > > >
> > > > rho:long_name = "in situ density" ;
> > > >
> > > > rho:units = "kg/m^3" ;
> > > >
> > > > rho:valid_range = -10.f, 100000.f ;
> > > >
> > > > rho:missing_value = -1.e+20f ;
> > > >
> > > > rho:_FillValue = -1.e+20f ;
> > > >
> > > > rho:cell_methods = "time: mean" ;
> > > >
> > > > rho:time_avg_info =
> > "average_T1,average_T2,average_DT" ;
> > > >
> > > > rho:coordinates = "geolon_t geolat_t" ;
> > > >
> > > > float neutral_rho(Time, st_ocean, yt_ocean,
> > xt_ocean) ;
> > > >
> > > > neutral_rho:long_name = "potential density
> estimate of
> > > neutral
> > > > density" ;
> > > >
> > > > neutral_rho:units = "kg/m^3" ;
> > > >
> > > > neutral_rho:valid_range = -10.f, 100000.f ;
> > > >
> > > > neutral_rho:missing_value = -1.e+20f ;
> > > >
> > > > neutral_rho:_FillValue = -1.e+20f ;
> > > >
> > > > neutral_rho:cell_methods = "time: mean" ;
> > > >
> > > > neutral_rho:time_avg_info =
> > > "average_T1,average_T2,average_DT" ;
> > > >
> > > > neutral_rho:coordinates = "geolon_t geolat_t" ;
> > > >
> > > > float pot_rho_0(Time, st_ocean, yt_ocean,
> xt_ocean) ;
> > > >
> > > > pot_rho_0:long_name = "potential density
> > referenced to 0
> > > dbar" ;
> > > >
> > > > pot_rho_0:units = "kg/m^3" ;
> > > >
> > > > pot_rho_0:valid_range = -10.f, 100000.f ;
> > > >
> > > > pot_rho_0:missing_value = -1.e+20f ;
> > > >
> > > > pot_rho_0:_FillValue = -1.e+20f ;
> > > >
> > > > pot_rho_0:cell_methods = "time: mean" ;
> > > >
> > > > pot_rho_0:time_avg_info =
> > > "average_T1,average_T2,average_DT" ;
> > > >
> > > > pot_rho_0:coordinates = "geolon_t geolat_t" ;
> > > >
> > > > pot_rho_0:standard_name =
> > "sea_water_potential_density" ;
> > > >
> > > > float salt_on_rho(Time, potrho, grid_yt_ocean,
> > > grid_xt_ocean) ;
> > > >
> > > > salt_on_rho:long_name = "salt on potential density
> > surface" ;
> > > >
> > > > salt_on_rho:units = "psu" ;
> > > >
> > > > salt_on_rho:valid_range = 0.f, 1000.f ;
> > > >
> > > > salt_on_rho:missing_value = -1.e+20f ;
> > > >
> > > > salt_on_rho:_FillValue = -1.e+20f ;
> > > >
> > > > salt_on_rho:cell_methods = "time: mean" ;
> > > >
> > > > salt_on_rho:time_avg_info =
> > > "average_T1,average_T2,average_DT" ;
> > > >
> > > > float potrho_mix_depth(Time, yt_ocean, xt_ocean) ;
> > > >
> > > > potrho_mix_depth:long_name = "Depth of potential
> > density
> > > mixed
> > > > layer" ;
> > > >
> > > > potrho_mix_depth:units = "m" ;
> > > >
> > > > potrho_mix_depth:valid_range = -1000000.f,
> 1000000.f ;
> > > >
> > > > potrho_mix_depth:missing_value = -1.e+20f ;
> > > >
> > > > potrho_mix_depth:_FillValue = -1.e+20f ;
> > > >
> > > > potrho_mix_depth:cell_methods = "time: mean" ;
> > > >
> > > > potrho_mix_depth:time_avg_info =
> > > > "average_T1,average_T2,average_DT" ;
> > > >
> > > > potrho_mix_depth:coordinates = "geolon_t geolat_t"
> ;
> > > >
> > > > float potrho_mix_base(Time, yt_ocean, xt_ocean) ;
> > > >
> > > > potrho_mix_base:long_name = "Potential density at
> > mixed layer
> > > > base" ;
> > > >
> > > > potrho_mix_base:units = "kg/m^3" ;
> > > >
> > > > potrho_mix_base:valid_range = -1000000.f,
> 1000000.f ;
> > > >
> > > > potrho_mix_base:missing_value = -1.e+20f ;
> > > >
> > > > potrho_mix_base:_FillValue = -1.e+20f ;
> > > >
> > > > potrho_mix_base:cell_methods = "time: mean" ;
> > > >
> > > > potrho_mix_base:time_avg_info =
> > > "average_T1,average_T2,average_DT" ;
> > > >
> > > > potrho_mix_base:coordinates = "geolon_t geolat_t" ;
> > > >
> > > > float press(Time, st_ocean, yt_ocean, xt_ocean) ;
> > > >
> > > > press:long_name = "absolute pressure" ;
> > > >
> > > > press:units = "dbar" ;
> > > >
> > > > press:valid_range = -10.f, 1000000.f ;
> > > >
> > > > press:missing_value = -1.e+20f ;
> > > >
> > > > press:_FillValue = -1.e+20f ;
> > > >
> > > > press:cell_methods = "time: mean" ;
> > > >
> > > > press:time_avg_info =
> > "average_T1,average_T2,average_DT" ;
> > > >
> > > > press:coordinates = "geolon_t geolat_t" ;
> > > >
> > > > float mld(Time, yt_ocean, xt_ocean) ;
> > > >
> > > > mld:long_name = "mixed layer depth determined by
> > density
> > > criteria" ;
> > > >
> > > > mld:units = "m" ;
> > > >
> > > > mld:valid_range = 0.f, 1000000.f ;
> > > >
> > > > mld:missing_value = -1.e+20f ;
> > > >
> > > > mld:_FillValue = -1.e+20f ;
> > > >
> > > > mld:cell_methods = "time: mean" ;
> > > >
> > > > mld:time_avg_info =
> > "average_T1,average_T2,average_DT" ;
> > > >
> > > > mld:coordinates = "geolon_t geolat_t" ;
> > > >
> > > > mld:standard_name =
> > > > "ocean_mixed_layer_thickness_defined_by_sigma_t" ;
> > > >
> > > > double average_T1(Time) ;
> > > >
> > > > average_T1:long_name = "Start time for average
> > period" ;
> > > >
> > > > average_T1:units = "days since 1980-01-01
> 00:00:00" ;
> > > >
> > > > average_T1:missing_value = 1.e+20 ;
> > > >
> > > > average_T1:_FillValue = 1.e+20 ;
> > > >
> > > > double average_T2(Time) ;
> > > >
> > > > average_T2:long_name = "End time for average
> period" ;
> > > >
> > > > average_T2:units = "days since 1980-01-01
> 00:00:00" ;
> > > >
> > > > average_T2:missing_value = 1.e+20 ;
> > > >
> > > > average_T2:_FillValue = 1.e+20 ;
> > > >
> > > > double average_DT(Time) ;
> > > >
> > > > average_DT:long_name = "Length of average period" ;
> > > >
> > > > average_DT:units = "days" ;
> > > >
> > > > average_DT:missing_value = 1.e+20 ;
> > > >
> > > > average_DT:_FillValue = 1.e+20 ;
> > > >
> > > > double Time_bounds(Time, nv) ;
> > > >
> > > > Time_bounds:long_name = "Time axis boundaries" ;
> > > >
> > > > Time_bounds:units = "days" ;
> > > >
> > > > Time_bounds:missing_value = 1.e+20 ;
> > > >
> > > > Time_bounds:_FillValue = 1.e+20 ;
> > > >
> > > >
> > > > // global attributes:
> > > >
> > > > :filename = "ocean_layer.nc
> > <http://ocean_layer.nc> <http://ocean_layer.nc>
> > > <http://ocean_layer.nc>" ;
> > > >
> > > > :title = "MOM4 box" ;
> > > >
> > > > :grid_type = "regular" ;
> > > >
> > > > :grid_tile = "N/A" ;
> > > >
> > > > data:
> > > >
> > > >
> > > > grid_xt_ocean = 1.25, 3.75, 6.25, 8.75, 11.25,
> > 13.75,
> > > 16.25,
> > > > 18.75, 21.25,
> > > >
> > > > 23.75, 26.25, 28.75, 31.25, 33.75, 36.25,
> > 38.75, 41.25,
> > > > 43.75, 46.25,
> > > >
> > > > 48.75, 51.25, 53.75, 56.25, 58.75 ;
> > > >
> > > >
> > > > grid_yt_ocean = 1.25, 3.7488100528717,
> > 6.2393012046814,
> > > > 8.71919345855713,
> > > >
> > > > 11.1815176010132, 13.6242818832397,
> > 16.0408229827881,
> > > > 18.4296073913574,
> > > >
> > > > 20.784387588501, 23.1042194366455,
> > 25.3833503723145,
> > > > 27.6215190887451,
> > > >
> > > > 29.813497543335, 31.9597606658936,
> > 34.0555992126465,
> > > > 36.1022338867188,
> > > >
> > > > 38.0954322814941, 40.0371551513672,
> > 41.9235687255859,
> > > > 43.7573394775391,
> > > >
> > > > 45.5349464416504, 47.259708404541,
> > 48.9283294677734,
> > > > 50.5447235107422,
> > > >
> > > > 52.1057090759277, 53.6157531738281,
> > 55.0716934204102,
> > > > 56.4785079956055,
> > > >
> > > > 57.8329429626465, 59.1404571533203,
> > 60.3976211547852,
> > > > 61.6103477478027,
> > > >
> > > > 62.7749481201172, 63.8977813720703,
> > 64.9748153686523 ;
> > > >
> > > >
> > > > theta = -1.84, -1.52, -1.2, -0.88, -0.56, -0.24,
> > > > 0.0800000000000003, 0.4,
> > > >
> > > > 0.72, 1.04, 1.36, 1.68, 2, 2.32, 2.64, 2.96,
> > 3.28, 3.6,
> > > > 3.92, 4.24, 4.56,
> > > >
> > > > 4.88, 5.2, 5.52, 5.84, 6.16, 6.48, 6.8, 7.12,
> > 7.44,
> > > 7.76,
> > > > 8.08, 8.4,
> > > >
> > > > 8.72, 9.04, 9.36, 9.68000000000001, 10,
> > 10.32, 10.64,
> > > > 10.96, 11.28, 11.6,
> > > >
> > > > 11.92, 12.24, 12.56, 12.88, 13.2, 13.52,
> > 13.84, 14.16,
> > > > 14.48, 14.8,
> > > >
> > > > 15.12, 15.44, 15.76, 16.08, 16.4, 16.72,
> > 17.04, 17.36,
> > > > 17.68, 18, 18.32,
> > > >
> > > > 18.64, 18.96, 19.28, 19.6, 19.92, 20.24,
> > 20.56, 20.88,
> > > > 21.2, 21.52,
> > > >
> > > > 21.84, 22.16, 22.48, 22.8, 23.12, 23.44,
> > 23.76, 24.08,
> > > > 24.4, 24.72,
> > > >
> > > > 25.04, 25.36, 25.68, 26, 26.32, 26.64, 26.96,
> > 27.28,
> > > 27.6,
> > > > 27.92, 28.24,
> > > >
> > > > 28.56, 28.88, 29.2, 29.52, 29.84 ;
> > > >
> > > >
> > > > theta_edges = 1028, 1028.1, 1028.2, 1028.3,
> > 1028.4, 1028.5,
> > > > 1028.6, 1028.7,
> > > >
> > > > 1028.8, 1028.9, 1029, 1029.1, 1029.2, 1029.3,
> > 1029.4,
> > > > 1029.5, 1029.6,
> > > >
> > > > 1029.7, 1029.8, 1029.9, 1030, 1030.1, 1030.2,
> > 1030.3,
> > > > 1030.4, 1030.5,
> > > >
> > > > 1030.6, 1030.7, 1030.8, 1030.9, 1031, 1031.1,
> > 1031.2,
> > > > 1031.3, 1031.4,
> > > >
> > > > 1031.5, 1031.6, 1031.7, 1031.8, 1031.9, 1032,
> > 1032.1,
> > > > 1032.2, 1032.3,
> > > >
> > > > 1032.4, 1032.5, 1032.6, 1032.7, 1032.8,
> > 1032.9, 1033,
> > > > 1033.1, 1033.2,
> > > >
> > > > 1033.3, 1033.4, 1033.49999999999,
> > 1033.59999999999,
> > > > 1033.69999999999,
> > > >
> > > > 1033.79999999999, 1033.89999999999,
> > 1033.99999999999,
> > > > 1034.09999999999,
> > > >
> > > > 1034.19999999999, 1034.29999999999,
> > 1034.39999999999,
> > > > 1034.49999999999,
> > > >
> > > > 1034.59999999999, 1034.69999999999,
> > 1034.79999999999,
> > > > 1034.89999999999,
> > > >
> > > > 1034.99999999999, 1035.09999999999,
> > 1035.19999999999,
> > > > 1035.29999999999,
> > > >
> > > > 1035.39999999999, 1035.49999999999,
> > 1035.59999999999,
> > > > 1035.69999999999,
> > > >
> > > > 1035.79999999999, 1035.89999999999,
> > 1035.99999999999,
> > > > 1036.09999999999,
> > > >
> > > > 1036.19999999999, 1036.29999999999,
> > 1036.39999999999,
> > > > 1036.49999999999,
> > > >
> > > > 1036.59999999999, 1036.69999999999,
> > 1036.79999999999,
> > > > 1036.89999999999,
> > > >
> > > > 1036.99999999999, 1037.09999999999,
> > 1037.19999999999,
> > > > 1037.29999999999,
> > > >
> > > > 1037.39999999999, 1037.49999999999,
> > 1037.59999999999,
> > > > 1037.69999999999,
> > > >
> > > > 1037.79999999999, 1037.89999999999,
> > 1037.99999999999 ;
> > > >
> > > >
> > > > Time = 2 ;
> > > >
> > > >
> > > > nv = 1, 2 ;
> > > >
> > > >
> > > > xt_ocean = 1.25, 3.75, 6.25, 8.75, 11.25, 13.75,
> > 16.25,
> > > 18.75,
> > > > 21.25, 23.75,
> > > >
> > > > 26.25, 28.75, 31.25, 33.75, 36.25, 38.75,
> > 41.25, 43.75,
> > > > 46.25, 48.75,
> > > >
> > > > 51.25, 53.75, 56.25, 58.75 ;
> > > >
> > > >
> > > > yt_ocean = 1.25, 3.7488100528717,
> 6.2393012046814,
> > > > 8.71919345855713,
> > > >
> > > > 11.1815176010132, 13.6242818832397,
> > 16.0408229827881,
> > > > 18.4296073913574,
> > > >
> > > > 20.784387588501, 23.1042194366455,
> > 25.3833503723145,
> > > > 27.6215190887451,
> > > >
> > > > 29.813497543335, 31.9597606658936,
> > 34.0555992126465,
> > > > 36.1022338867188,
> > > >
> > > > 38.0954322814941, 40.0371551513672,
> > 41.9235687255859,
> > > > 43.7573394775391,
> > > >
> > > > 45.5349464416504, 47.259708404541,
> > 48.9283294677734,
> > > > 50.5447235107422,
> > > >
> > > > 52.1057090759277, 53.6157531738281,
> > 55.0716934204102,
> > > > 56.4785079956055,
> > > >
> > > > 57.8329429626465, 59.1404571533203,
> > 60.3976211547852,
> > > > 61.6103477478027,
> > > >
> > > > 62.7749481201172, 63.8977813720703,
> > 64.9748153686523 ;
> > > >
> > > >
> > > > st_ocean = 17.75025, 53.25075, 88.75125,
> 124.25175,
> > > 159.75225,
> > > > 195.25275,
> > > >
> > > > 230.75325, 266.25375, 314.34159289856,
> > 399.171716592407,
> > > >
> > > > 541.922400494385, 759.079548358154,
> > 1061.10117883301,
> > > > 1451.56990550537,
> > > >
> > > > 1926.90292906494, 2476.64250944824,
> > 3084.30280480957,
> > > > 3728.70522619629 ;
> > > >
> > > >
> > > > st_edges_ocean = 0, 35.5005, 71.001, 106.5015,
> > 142.002,
> > > > 177.5025, 213.003,
> > > >
> > > > 248.5035, 290.29765597229, 356.756654745483,
> > > 470.547043066406,
> > > >
> > > > 650.50097442627, 910.090332641602,
> > 1256.33548026123,
> > > > 1689.23641728516,
> > > >
> > > > 2201.77290498047, 2780.47265712891,
> > 3406.50401550293,
> > > > 4057.20024763184 ;
> > > >
> > > >
> > > > potrho = 1028.05, 1028.15, 1028.25, 1028.35,
> > 1028.45,
> > > 1028.55,
> > > > 1028.65,
> > > >
> > > > 1028.75, 1028.85, 1028.95, 1029.05, 1029.15,
> > 1029.25,
> > > > 1029.35, 1029.45,
> > > >
> > > > 1029.55, 1029.65, 1029.75, 1029.85, 1029.95,
> > 1030.05,
> > > > 1030.15, 1030.25,
> > > >
> > > > 1030.35, 1030.45, 1030.55, 1030.65, 1030.75,
> > 1030.85,
> > > > 1030.95, 1031.05,
> > > >
> > > > 1031.15, 1031.25, 1031.35, 1031.45, 1031.55,
> > 1031.65,
> > > > 1031.75, 1031.85,
> > > >
> > > > 1031.95, 1032.05, 1032.15, 1032.25, 1032.35,
> > 1032.45,
> > > > 1032.55, 1032.65,
> > > >
> > > > 1032.75, 1032.85, 1032.95, 1033.05, 1033.15,
> > 1033.25,
> > > > 1033.35, 1033.45,
> > > >
> > > > 1033.54999999999, 1033.64999999999,
> > 1033.74999999999,
> > > > 1033.84999999999,
> > > >
> > > > 1033.94999999999, 1034.04999999999,
> > 1034.14999999999,
> > > > 1034.24999999999,
> > > >
> > > > 1034.34999999999, 1034.44999999999,
> > 1034.54999999999,
> > > > 1034.64999999999,
> > > >
> > > > 1034.74999999999, 1034.84999999999,
> > 1034.94999999999,
> > > > 1035.04999999999,
> > > >
> > > > 1035.14999999999, 1035.24999999999,
> > 1035.34999999999,
> > > > 1035.44999999999,
> > > >
> > > > 1035.54999999999, 1035.64999999999,
> > 1035.74999999999,
> > > > 1035.84999999999,
> > > >
> > > > 1035.94999999999, 1036.04999999999,
> > 1036.14999999999,
> > > > 1036.24999999999,
> > > >
> > > > 1036.34999999999, 1036.44999999999,
> > 1036.54999999999,
> > > > 1036.64999999999,
> > > >
> > > > 1036.74999999999, 1036.84999999999,
> > 1036.94999999999,
> > > > 1037.04999999999,
> > > >
> > > > 1037.14999999999, 1037.24999999999,
> > 1037.34999999999,
> > > > 1037.44999999999,
> > > >
> > > > 1037.54999999999, 1037.64999999999,
> > 1037.74999999999,
> > > > 1037.84999999999,
> > > >
> > > > 1037.94999999999 ;
> > > >
> > > >
> > > > potrho_edges = 1028, 1028.1, 1028.2, 1028.3,
> 1028.4,
> > > 1028.5,
> > > > 1028.6, 1028.7,
> > > >
> > > > 1028.8, 1028.9, 1029, 1029.1, 1029.2, 1029.3,
> > 1029.4,
> > > > 1029.5, 1029.6,
> > > >
> > > > 1029.7, 1029.8, 1029.9, 1030, 1030.1, 1030.2,
> > 1030.3,
> > > > 1030.4, 1030.5,
> > > >
> > > > 1030.6, 1030.7, 1030.8, 1030.9, 1031, 1031.1,
> > 1031.2,
> > > > 1031.3, 1031.4,
> > > >
> > > > 1031.5, 1031.6, 1031.7, 1031.8, 1031.9, 1032,
> > 1032.1,
> > > > 1032.2, 1032.3,
> > > >
> > > > 1032.4, 1032.5, 1032.6, 1032.7, 1032.8,
> > 1032.9, 1033,
> > > > 1033.1, 1033.2,
> > > >
> > > > 1033.3, 1033.4, 1033.49999999999,
> > 1033.59999999999,
> > > > 1033.69999999999,
> > > >
> > > > 1033.79999999999, 1033.89999999999,
> > 1033.99999999999,
> > > > 1034.09999999999,
> > > >
> > > > 1034.19999999999, 1034.29999999999,
> > 1034.39999999999,
> > > > 1034.49999999999,
> > > >
> > > > 1034.59999999999, 1034.69999999999,
> > 1034.79999999999,
> > > > 1034.89999999999,
> > > >
> > > > 1034.99999999999, 1035.09999999999,
> > 1035.19999999999,
> > > > 1035.29999999999,
> > > >
> > > > 1035.39999999999, 1035.49999999999,
> > 1035.59999999999,
> > > > 1035.69999999999,
> > > >
> > > > 1035.79999999999, 1035.89999999999,
> > 1035.99999999999,
> > > > 1036.09999999999,
> > > >
> > > > 1036.19999999999, 1036.29999999999,
> > 1036.39999999999,
> > > > 1036.49999999999,
> > > >
> > > > 1036.59999999999, 1036.69999999999,
> > 1036.79999999999,
> > > > 1036.89999999999,
> > > >
> > > > 1036.99999999999, 1037.09999999999,
> > 1037.19999999999,
> > > > 1037.29999999999,
> > > >
> > > > 1037.39999999999, 1037.49999999999,
> > 1037.59999999999,
> > > > 1037.69999999999,
> > > >
> > > > 1037.79999999999, 1037.89999999999,
> > 1037.99999999999 ;
> > > >
> > > > }
> > > >
> > > >
> > > > I am having trouble deciding which will be the
> xdef,
> > > ydef, zdef,
> > > > and tdef values. Also, how do I find what UNDEF
> > number to
> > > use.
> > > > Your help will be greatly appreciated.
> > > >
> > > > Thanks,
> > > >
> > > > David
> > > >
> > > >
> > > >
> > > >
> > > >
> > > > _______________________________________________
> > > > gradsusr mailing list
> > > > gradsusr at gradsusr.org <mailto:gradsusr at gradsusr.org>
> > <mailto:gradsusr at gradsusr.org <mailto:gradsusr at gradsusr.org>>
> > > > http://gradsusr.org/mailman/listinfo/gradsusr
> > > >
> > >
> > > --
> > >
> > > Please note that Charles.Seman at noaa.gov
> > <mailto:Charles.Seman at noaa.gov>
> > > <mailto:Charles.Seman at noaa.gov
> > <mailto:Charles.Seman at noaa.gov>> should be considered my NOAA
> > > email address, not cjs at gfdl.noaa.gov
> > <mailto:cjs at gfdl.noaa.gov> <mailto:cjs at gfdl.noaa.gov
> > <mailto:cjs at gfdl.noaa.gov>>.
> > >
> > >
> > ********************************************************************
> > > Charles Seman Charles.Seman at noaa.gov
> > <mailto:Charles.Seman at noaa.gov> <mailto:Charles.Seman at noaa.gov
> > <mailto:Charles.Seman at noaa.gov>>
> > > U.S. Department of Commerce / NOAA / OAR
> > > Geophysical Fluid Dynamics Laboratory voice: (609)
> > 452-6547
> > > 201 Forrestal Road fax: (609)
> > 987-5063
> > > Princeton, NJ 08540-6649 http://www.gfdl.noaa.gov/~cjs/
> > >
> > ********************************************************************
> > >
> > > "The contents of this message are mine personally and do not
> > reflect any
> > > official or unofficial position of the United States Federal
> > Government,
> > > the United States Department of Commerce, or NOAA."
> > > _______________________________________________
> > > gradsusr mailing list
> > > gradsusr at gradsusr.org <mailto:gradsusr at gradsusr.org>
> > <mailto:gradsusr at gradsusr.org <mailto:gradsusr at gradsusr.org>>
> > > http://gradsusr.org/mailman/listinfo/gradsusr
> > >
> > >
> > >
> > >
> > > _______________________________________________
> > > gradsusr mailing list
> > > gradsusr at gradsusr.org <mailto:gradsusr at gradsusr.org>
> > > http://gradsusr.org/mailman/listinfo/gradsusr
> > >
> >
> > --
> >
> > Please note that Charles.Seman at noaa.gov
> > <mailto:Charles.Seman at noaa.gov> should be considered my NOAA
> > email address, not cjs at gfdl.noaa.gov <mailto:cjs at gfdl.noaa.gov>.
> >
> > ********************************************************************
> > Charles Seman Charles.Seman at noaa.gov <mailto:
> Charles.Seman at noaa.gov>
> > U.S. Department of Commerce / NOAA / OAR
> > Geophysical Fluid Dynamics Laboratory voice: (609)
> 452-6547
> > 201 Forrestal Road fax: (609)
> 987-5063
> > Princeton, NJ 08540-6649 http://www.gfdl.noaa.gov/~cjs/
> > ********************************************************************
> >
> > "The contents of this message are mine personally and do not reflect
> any
> > official or unofficial position of the United States Federal
> Government,
> > the United States Department of Commerce, or NOAA."
> > _______________________________________________
> > gradsusr mailing list
> > gradsusr at gradsusr.org <mailto:gradsusr at gradsusr.org>
> > http://gradsusr.org/mailman/listinfo/gradsusr
> >
> >
> >
> >
> > _______________________________________________
> > gradsusr mailing list
> > gradsusr at gradsusr.org
> > http://gradsusr.org/mailman/listinfo/gradsusr
> >
>
> --
>
> Please note that Charles.Seman at noaa.gov should be considered my NOAA
> email address, not cjs at gfdl.noaa.gov.
>
> ********************************************************************
> Charles Seman Charles.Seman at noaa.gov
> U.S. Department of Commerce / NOAA / OAR
> Geophysical Fluid Dynamics Laboratory voice: (609) 452-6547
> 201 Forrestal Road fax: (609) 987-5063
> Princeton, NJ 08540-6649 http://www.gfdl.noaa.gov/~cjs/
> ********************************************************************
>
> "The contents of this message are mine personally and do not reflect any
> official or unofficial position of the United States Federal Government,
> the United States Department of Commerce, or NOAA."
> _______________________________________________
> gradsusr mailing list
> gradsusr at gradsusr.org
> http://gradsusr.org/mailman/listinfo/gradsusr
>
>
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