<div dir="ltr">Thanks a bunch,<div><br></div><div>I got it to read into the udunits file but I got the following problem:</div><div><br></div><div><p style="margin:0px;font-size:11px;font-family:Menlo">ga-> sdfopen /Users/ninjawarrior343/University/Research_Job/atmos_month.nc.0000 </p>
<p style="margin:0px;font-size:11px;font-family:Menlo">Scanning self-describing file: /Users/ninjawarrior343/University/Research_Job/atmos_month.nc.0000</p><p style="margin:0px;font-size:11px;font-family:Menlo">SDF Error: 365 day calendars are no longer supported by sdfopen.</p>
<p style="margin:0px;font-size:11px;font-family:Menlo"> To open this file with GrADS, use a descriptor file with </p><p style="margin:0px;font-size:11px;font-family:Menlo"> a complete TDEF entry and OPTIONS 365_day_calendar. </p>
<p style="margin:0px;font-size:11px;font-family:Menlo">
</p><p style="margin:0px;font-size:11px;font-family:Menlo"> Documentation is at <a href="http://iges.org/grads/gadoc/SDFdescriptorfile.html">http://iges.org/grads/gadoc/SDFdescriptorfile.html</a></p><p style="margin:0px;font-size:11px;font-family:Menlo">
<br></p><p style="margin:0px"><font face="arial, helvetica, sans-serif">I went to the documentation at the suggested site but I still don't really understand what I have to do.</font></p><p style="margin:0px"><font face="arial, helvetica, sans-serif"><br>
</font></p><p style="margin:0px"><font face="arial, helvetica, sans-serif">Thanks,</font></p><p style="margin:0px"><font face="arial, helvetica, sans-serif"><br></font></p><p style="margin:0px"><font face="arial, helvetica, sans-serif">David</font></p>
<div class="gmail_extra"><br><div class="gmail_quote">On Mon, Jun 16, 2014 at 9:04 PM, Hoop <span dir="ltr"><<a href="mailto:hoop@colorado.edu" target="_blank">hoop@colorado.edu</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex">David Stanfel,<br>
<br>
GADDIR should be an absolute path.<br>
<br>
-Hoop<br>
<br>
On 06/16/2014 08:28 PM, <a href="mailto:gradsusr-request@gradsusr.org" target="_blank">gradsusr-request@gradsusr.org</a> wrote:<br>
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> 1. Re: Errors installing readline and ncurses supplies<br>
> (David Stanfel)<br>
><br>
><br>
> ----------------------------------------------------------------------<br>
><br>
> Message: 1<br>
> Date: Mon, 16 Jun 2014 20:28:55 -0600<br>
> From: David Stanfel <<a href="mailto:dstanfel@ualberta.ca" target="_blank">dstanfel@ualberta.ca</a>><br>
> Subject: Re: [gradsusr] Errors installing readline and ncurses<br>
> supplies<br>
> To: GrADS Users Forum <<a href="mailto:gradsusr@gradsusr.org" target="_blank">gradsusr@gradsusr.org</a>><br>
> Message-ID:<br>
> <<a href="mailto:CADML8btfB6OfPeOT7-0iTvZ%2B9nGxzMkjxRNFBE5mfWtsrsgYNg@mail.gmail.com" target="_blank">CADML8btfB6OfPeOT7-0iTvZ+9nGxzMkjxRNFBE5mfWtsrsgYNg@mail.gmail.com</a>><br>
> Content-Type: text/plain; charset="utf-8"<br>
><br>
> I downloaded and unpacked the files and changed the GADDIR directory. I<br>
> still can't open the .nc file though. Here is the command line (in GrADS):<br>
><br>
> ga-> sdfopen ocean_topaz_wc_btm.nc.0000<br>
><br>
> Scanning self-describing file: ocean_topaz_wc_btm.nc.0000<br>
><br>
> udunits(3): Couldn't open units database<br>
> "University/Research_job/supplibs/udunits.dat": No such file or directory<br>
><br>
> gadsdf: UDUNITS package initialization failure.<br>
><br>
> ga-> quit<br>
><br>
> GX Package Terminated<br>
><br>
> dstanfel:bin ninjawarrior343$ cd<br>
><br>
> dstanfel:~ ninjawarrior343$ cd University/Research_job/supplibs/<br>
><br>
> dstanfel:supplibs ninjawarrior343$ ls<br>
><br>
> font0.dat font3.dat hires tables<br>
><br>
> font1.dat font4.dat lowres tarfiles<br>
><br>
> font2.dat font5.dat mres udunits.dat<br>
><br>
><br>
> You can see that udunits.dat is in the specified path. Where did I go wrong?<br>
><br>
><br>
> Thanks,<br>
><br>
><br>
> David<br>
><br>
><br>
> On Mon, Jun 16, 2014 at 4:24 PM, Jennifer Adams <<a href="mailto:jma@cola.iges.org" target="_blank">jma@cola.iges.org</a>> wrote:<br>
><br>
>> Take a look at the Downloads web page (<br>
>> <a href="http://www.iges.org/grads/downloads.html" target="_blank">http://www.iges.org/grads/downloads.html</a>) -- scroll down to the part<br>
>> about "Supplementary Files" . The udunits file GrADS is looking for is in<br>
>> data2.tar.gz.<br>
>> --Jennifer<br>
>><br>
>><br>
>><br>
>> On Jun 16, 2014, at 4:47 PM, David Stanfel wrote:<br>
>><br>
>> Thanks for the reply,<br>
>><br>
>> I downloaded that and tried to open a netcdf file (.nc) and got the<br>
>> following result:<br>
>><br>
>> ga-> sdfopen <a href="http://atmos_4xdaily_instant.nc" target="_blank">atmos_4xdaily_instant.nc</a><br>
>> Scanning self-describing file: <a href="http://atmos_4xdaily_instant.nc" target="_blank">atmos_4xdaily_instant.nc</a><br>
>> udunits(3): Couldn't open units database<br>
>> "/usr/local/lib/grads/udunits.dat": No such file or directory<br>
>> gadsdf: UDUNITS package initialization failure.<br>
>><br>
>> How do I install the udunits package?<br>
>><br>
>> Thanks,<br>
>><br>
>> David<br>
>><br>
>><br>
>> On Mon, Jun 16, 2014 at 2:26 PM, Jennifer Adams <<a href="mailto:jma@cola.iges.org" target="_blank">jma@cola.iges.org</a>> wrote:<br>
>><br>
>>> Please try the pre-compiled binaries instead of building from source? the<br>
>>> 10.7 build should work fine on Mavericks:<br>
>>> <a href="ftp://cola.gmu.edu/grads/2.1/grads-2.1.a2-bin-darwin11.4.tar.gz" target="_blank">ftp://cola.gmu.edu/grads/2.1/grads-2.1.a2-bin-darwin11.4.tar.gz</a><br>
>>><br>
>>> -Jennifer<br>
>>><br>
>>> On Jun 16, 2014, at 4:07 PM, David Stanfel wrote:<br>
>>><br>
>>> Hello,<br>
>>><br>
>>> I am new to GrADS and to the Unix language. I run Mac OS X Mavericks.<br>
>>> When I tried to install the readline supplib I got the following error:<br>
>>><br>
>>> mv tilde.o tilde.so<br>
>>> rm -f compat.so<br>
>>> gcc -c -DHAVE_CONFIG_H -I. -I.. -I.. -DRL_LIBRARY_VERSION='"5.0"' -g -O<br>
>>> -fno-common -o compat.o ../compat.c<br>
>>> mv compat.o compat.so<br>
>>> rm -f libreadline.5.0.dylib<br>
>>> gcc -dynamic -arch_only `/usr/bin/arch` -install_name<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/lib/libreadline.5.0.dylib<br>
>>> -current_version 5.0 -compatibility_version 5 -v -o libreadline.5.0.dylib<br>
>>> readline.so vi_mode.so funmap.so keymaps.so parens.so search.so rltty.so<br>
>>> complete.so bind.so isearch.so display.so signals.so util.so kill.so<br>
>>> undo.so macro.so input.so callback.so terminal.so text.so nls.so misc.so<br>
>>> xmalloc.so history.so histexpand.so histfile.so histsearch.so shell.so<br>
>>> mbutil.so tilde.so compat.so -lncurses<br>
>>> Apple LLVM version 5.1 (clang-503.0.40) (based on LLVM 3.4svn)<br>
>>> Target: x86_64-apple-darwin13.1.0<br>
>>> Thread model: posix<br>
>>> clang: error: invalid argument '-compatibility_version 5' only allowed<br>
>>> with '-dynamiclib'<br>
>>> make[1]: *** [libreadline.5.0.dylib] Error 1<br>
>>> make: [shared] Error 2 (ignored)<br>
>>> /bin/sh ./support/mkinstalldirs<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/include \<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/include/readline<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/lib \<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/info<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/man/man3<br>
>>> mkdir -p -- /Users/ninjawarrior343/supplibs/src/readline/include<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/include/readline<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/lib<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/info<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/man/man3<br>
>>> for f in readline.h chardefs.h keymaps.h history.h tilde.h rlstdc.h<br>
>>> rlconf.h rltypedefs.h; do \<br>
>>> /usr/bin/install -c -m 644 ./$f<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/include/readline ; \<br>
>>> done<br>
>>> ( if test -d doc ; then \<br>
>>> cd doc && \<br>
>>> /Applications/Xcode.app/Contents/Developer/usr/bin/make<br>
>>> infodir=/Users/ninjawarrior343/supplibs/src/readline/info DESTDIR= install;<br>
>>> \<br>
>>> fi )<br>
>>> /bin/sh ../support/mkdirs<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/info<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/man/man3<br>
>>> if test -n "" ; then \<br>
>>> /bin/sh ../support/mkdirs ; \<br>
>>> fi<br>
>>> if test -f <a href="http://readline.info" target="_blank">readline.info</a>; then \<br>
>>> /usr/bin/install -c -m 644 <a href="http://readline.info" target="_blank">readline.info</a><br>
>>> /Users/ninjawarrior343/supplibs/src/readline/info/<a href="http://readline.info" target="_blank">readline.info</a>; \<br>
>>> else \<br>
>>> /usr/bin/install -c -m 644 ./<a href="http://readline.info" target="_blank">readline.info</a><br>
>>> /Users/ninjawarrior343/supplibs/src/readline/info/<a href="http://readline.info" target="_blank">readline.info</a>; \<br>
>>> fi<br>
>>> if test -f <a href="http://rluserman.info" target="_blank">rluserman.info</a>; then \<br>
>>> /usr/bin/install -c -m 644 <a href="http://rluserman.info" target="_blank">rluserman.info</a><br>
>>> /Users/ninjawarrior343/supplibs/src/readline/info/<a href="http://rluserman.info" target="_blank">rluserman.info</a>; \<br>
>>> else \<br>
>>> /usr/bin/install -c -m 644 ./<a href="http://rluserman.info" target="_blank">rluserman.info</a><br>
>>> /Users/ninjawarrior343/supplibs/src/readline/info/<a href="http://rluserman.info" target="_blank">rluserman.info</a>; \<br>
>>> fi<br>
>>> if test -f <a href="http://history.info" target="_blank">history.info</a>; then \<br>
>>> /usr/bin/install -c -m 644 <a href="http://history.info" target="_blank">history.info</a><br>
>>> /Users/ninjawarrior343/supplibs/src/readline/info/<a href="http://history.info" target="_blank">history.info</a>; \<br>
>>> else \<br>
>>> /usr/bin/install -c -m 644 ./<a href="http://history.info" target="_blank">history.info</a><br>
>>> /Users/ninjawarrior343/supplibs/src/readline/info/<a href="http://history.info" target="_blank">history.info</a>; \<br>
>>> fi<br>
>>> if /bin/sh -c 'install-info --version' >/dev/null 2>&1; then \<br>
>>> install-info<br>
>>> --dir-file=/Users/ninjawarrior343/supplibs/src/readline/info/dir \<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/info/<a href="http://readline.info" target="_blank">readline.info</a> ; \<br>
>>> install-info<br>
>>> --dir-file=/Users/ninjawarrior343/supplibs/src/readline/info/dir \<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/info/<a href="http://history.info" target="_blank">history.info</a> ; \<br>
>>> install-info<br>
>>> --dir-file=/Users/ninjawarrior343/supplibs/src/readline/info/dir \<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/info/<a href="http://rluserman.info" target="_blank">rluserman.info</a> ; \<br>
>>> else true; fi<br>
>>> /usr/bin/install -c -m 644 ./readline.3<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/man/man3/readline.3<br>
>>> /usr/bin/install -c -m 644 ./history.3<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/man/man3/history.3<br>
>>> if test -n "" ; then \<br>
>>> if test -f readline.html; then \<br>
>>> /usr/bin/install -c -m 644 readline.html /readline.html; \<br>
>>> else \<br>
>>> /usr/bin/install -c -m 644 ./readline.html /readline.html; \<br>
>>> fi ; \<br>
>>> if test -f history.html; then \<br>
>>> /usr/bin/install -c -m 644 history.html /history.html; \<br>
>>> else \<br>
>>> /usr/bin/install -c -m 644 ./history.html /history.html; \<br>
>>> fi ; \<br>
>>> if test -f rluserman.html; then \<br>
>>> /usr/bin/install -c -m 644 rluserman.html /rluserman.html; \<br>
>>> else \<br>
>>> /usr/bin/install -c -m 644 ./rluserman.html /rluserman.html; \<br>
>>> fi ; \<br>
>>> fi<br>
>>> mv /Users/ninjawarrior343/supplibs/src/readline/lib/libreadline.a<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/lib/libreadline.old<br>
>>> mv: rename /Users/ninjawarrior343/supplibs/src/readline/lib/libreadline.a<br>
>>> to /Users/ninjawarrior343/supplibs/src/readline/lib/libreadline.old: No<br>
>>> such file or directory<br>
>>> make: [install-static] Error 1 (ignored)<br>
>>> /usr/bin/install -c -m 644 libreadline.a<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/lib/libreadline.a<br>
>>> test -n "ranlib" && ranlib<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/lib/libreadline.a<br>
>>> mv /Users/ninjawarrior343/supplibs/src/readline/lib/libhistory.a<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/lib/libhistory.old<br>
>>> mv: rename /Users/ninjawarrior343/supplibs/src/readline/lib/libhistory.a<br>
>>> to /Users/ninjawarrior343/supplibs/src/readline/lib/libhistory.old: No such<br>
>>> file or directory<br>
>>> make: [install-static] Error 1 (ignored)<br>
>>> /usr/bin/install -c -m 644 libhistory.a<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/lib/libhistory.a<br>
>>> test -n "ranlib" && ranlib<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/lib/libhistory.a<br>
>>> test -d shlib || mkdir shlib<br>
>>> ( cd shlib ; /Applications/Xcode.app/Contents/Developer/usr/bin/make all<br>
>>> )<br>
>>> rm -f libreadline.5.0.dylib<br>
>>> gcc -dynamic -arch_only `/usr/bin/arch` -install_name<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/lib/libreadline.5.0.dylib<br>
>>> -current_version 5.0 -compatibility_version 5 -v -o libreadline.5.0.dylib<br>
>>> readline.so vi_mode.so funmap.so keymaps.so parens.so search.so rltty.so<br>
>>> complete.so bind.so isearch.so display.so signals.so util.so kill.so<br>
>>> undo.so macro.so input.so callback.so terminal.so text.so nls.so misc.so<br>
>>> xmalloc.so history.so histexpand.so histfile.so histsearch.so shell.so<br>
>>> mbutil.so tilde.so compat.so -lncurses<br>
>>> Apple LLVM version 5.1 (clang-503.0.40) (based on LLVM 3.4svn)<br>
>>> Target: x86_64-apple-darwin13.1.0<br>
>>> Thread model: posix<br>
>>> clang: error: invalid argument '-compatibility_version 5' only allowed<br>
>>> with '-dynamiclib'<br>
>>> make[1]: *** [libreadline.5.0.dylib] Error 1<br>
>>> make: [shared] Error 2 (ignored)<br>
>>> ( cd shlib ; /Applications/Xcode.app/Contents/Developer/usr/bin/make<br>
>>> DESTDIR= install )<br>
>>> /bin/sh ../support/mkdirs /Users/ninjawarrior343/supplibs/src/readline/lib<br>
>>> rm -f libreadline.5.0.dylib<br>
>>> gcc -dynamic -arch_only `/usr/bin/arch` -install_name<br>
>>> /Users/ninjawarrior343/supplibs/src/readline/lib/libreadline.5.0.dylib<br>
>>> -current_version 5.0 -compatibility_version 5 -v -o libreadline.5.0.dylib<br>
>>> readline.so vi_mode.so funmap.so keymaps.so parens.so search.so rltty.so<br>
>>> complete.so bind.so isearch.so display.so signals.so util.so kill.so<br>
>>> undo.so macro.so input.so callback.so terminal.so text.so nls.so misc.so<br>
>>> xmalloc.so history.so histexpand.so histfile.so histsearch.so shell.so<br>
>>> mbutil.so tilde.so compat.so -lncurses<br>
>>> Apple LLVM version 5.1 (clang-503.0.40) (based on LLVM 3.4svn)<br>
>>> Target: x86_64-apple-darwin13.1.0<br>
>>> Thread model: posix<br>
>>> clang: error: invalid argument '-compatibility_version 5' only allowed<br>
>>> with '-dynamiclib'<br>
>>> make[1]: *** [libreadline.5.0.dylib] Error 1<br>
>>> make: [install-shared] Error 2 (ignored)<br>
>>><br>
>>> It can't read or find libreadline.5.0.dylib (or so I think). I get a<br>
>>> similar error for ncurses:<br>
>>><br>
>>> gcc -DHAVE_CONFIG_H -I../ncurses -I. -I. -I../include -U_XOPEN_SOURCE<br>
>>> -D_XOPEN_SOURCE=500 -DSIGWINCH=28 -DNDEBUG<br>
>>> -I/Users/ninjawarrior343/supplibs/src/ncurses/include/ncurses -O2 --param<br>
>>> max-inline-insns-single=1200 -no-cpp-precomp -c<br>
>>> ../ncurses/./tty/hardscroll.c -o ../objects/hardscroll.o<br>
>>> clang: warning: argument unused during compilation: '--param<br>
>>> max-inline-insns-single=1200'<br>
>>> *error: **unable to open output file '../objects/hardscroll.o': 'Error<br>
>>> opening*<br>
>>> * output file '../objects/hardscroll.o': Permission denied'*<br>
>>> 1 error generated.<br>
>>> make[1]: *** [../objects/hardscroll.o] Error 1<br>
>>><br>
>>> make: *** [install] Error 2<br>
>>><br>
>>> Then when I tried to copy it, I get the following:<br>
>>><br>
>>> dstanfel:ncurses-5.7 ninjawarrior343$ cp<br>
>>> $HOME/supplibs/src/ncurses/lib/libncurses.a $HOME/supplibs/lib<br>
>>><br>
>>> cp: /Users/ninjawarrior343/supplibs/src/ncurses/lib/libncurses.a: No such<br>
>>> file or directory<br>
>>><br>
>>> The file was not created. Any help will be greatly appreciated.<br>
>>><br>
>>> Thanks,<br>
>>><br>
>>> David<br>
>>> _______________________________________________<br>
>>> gradsusr mailing list<br>
>>> <a href="mailto:gradsusr@gradsusr.org" target="_blank">gradsusr@gradsusr.org</a><br>
>>> <a href="http://gradsusr.org/mailman/listinfo/gradsusr" target="_blank">http://gradsusr.org/mailman/listinfo/gradsusr</a><br>
>>><br>
>>><br>
>>> --<br>
>>> Jennifer M. Adams<br>
>>> Center for Ocean-Land-Atmosphere Studies (COLA)<br>
>>> 111 Research Hall, Mail Stop 2B3<br>
>>> George Mason University<br>
>>> 4400 University Drive<br>
>>> Fairfax, VA 22030<br>
>>><br>
>>><br>
>>><br>
>>><br>
>>><br>
>>><br>
>>> _______________________________________________<br>
>>> gradsusr mailing list<br>
>>> <a href="mailto:gradsusr@gradsusr.org" target="_blank">gradsusr@gradsusr.org</a><br>
>>> <a href="http://gradsusr.org/mailman/listinfo/gradsusr" target="_blank">http://gradsusr.org/mailman/listinfo/gradsusr</a><br>
>>><br>
>>><br>
>> _______________________________________________<br>
>> gradsusr mailing list<br>
>> <a href="mailto:gradsusr@gradsusr.org" target="_blank">gradsusr@gradsusr.org</a><br>
>> <a href="http://gradsusr.org/mailman/listinfo/gradsusr" target="_blank">http://gradsusr.org/mailman/listinfo/gradsusr</a><br>
>><br>
>><br>
>> --<br>
>> Jennifer M. Adams<br>
>> Center for Ocean-Land-Atmosphere Studies (COLA)<br>
>> 111 Research Hall, Mail Stop 2B3<br>
>> George Mason University<br>
>> 4400 University Drive<br>
>> Fairfax, VA 22030<br>
>><br>
>><br>
>><br>
>><br>
>><br>
>><br>
>> _______________________________________________<br>
>> gradsusr mailing list<br>
>> <a href="mailto:gradsusr@gradsusr.org" target="_blank">gradsusr@gradsusr.org</a><br>
>> <a href="http://gradsusr.org/mailman/listinfo/gradsusr" target="_blank">http://gradsusr.org/mailman/listinfo/gradsusr</a><br>
>><br>
>><br>
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