<html><head></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">This was indeed another bug in the interface for hdf5 grids; the bug was for templated data sets, but has now been fixed. It will be available in the new release. Thanks for reporting it, and for your patience while waiting for the fixes to arrive. <div>--Jennifer<div><br><div><div>On Sep 20, 2013, at 10:15 AM, James E. Johnson wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><div>On Thursday 19 September 2013 06:11:44 pm James E. Johnson wrote:<br><blockquote type="cite">On Thursday 19 September 2013 04:55:58 pm Jennifer Adams wrote:<br></blockquote><blockquote type="cite"><blockquote type="cite">First of all, thank you for providing all the information and data I<br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite">needed to reproduce the error! The failure of method 1 (using array<br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite">indices in the units field of the variable declaration instead of<br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite">x,y,z,t,e) is indeed a bug that is unique to the hdf5 data type. The<br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite">critical bit of information in the error message from the HDF5 library<br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite">was this: "src and dest data spaces have different sizes." In method 1,<br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite">the variables are described to GrADS as being only 2-dimensional (i.e.,<br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite">not Z-varying) even though they really have 3 varying dimensions, and the<br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite">library trips on this deception. The netcdf library is not as fussy. I<br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite">will put a fix in version 2.1, but for now you will have to use method 2.<br></blockquote></blockquote><blockquote type="cite"><blockquote type="cite">--Jennifer<br></blockquote></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">Thanks Jennifer,<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">I think there may be another bug. I have a more extensive control file with<br></blockquote><blockquote type="cite">all the variables from the file. I can successfully display data from the<br></blockquote><blockquote type="cite">first variable I read, but subsequent variables complain:<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">HDF5-DIAG: Error detected in HDF5 (1.8.7) thread 0:<br></blockquote><blockquote type="cite"> #000: H5Shyper.c line 6593 in H5Sselect_hyperslab(): not a data space<br></blockquote><blockquote type="cite"> major: Invalid arguments to routine<br></blockquote><blockquote type="cite"> minor: Inappropriate type<br></blockquote><blockquote type="cite">HDF5 Error: unable to select dataspace hyperslab<br></blockquote><blockquote type="cite">Data Request Error: Error for variable 'uvai'<br></blockquote><blockquote type="cite"> Error ocurred at column 1<br></blockquote><blockquote type="cite">DISPLAY error: Invalid expression<br></blockquote><blockquote type="cite"> Expression = uvai<br></blockquote><br>One thing I notice is that if I close the control file, and reopen it, then I <br>can read another variable. But it seems GrADS 2.0.2 has a problem somewhere <br>allowing you to read/displaying mutliple variables.<br><br>-----------------------------------------------------------------------------<br>| James E. Johnson | address: |<br>| ADNET Systems, Inc. | NASA Goddard Space Flight Center |<br>| e-mail: <a href="mailto:james.johnson@nasa.gov">james.johnson@nasa.gov</a> | Data and Information Services Center |<br>| phone: 301-614-5121 | Code 610.2, Bldg 32, Room S130G |<br>| fax: 301-614-5268 | Greenbelt, MD 20771 |<br>------------------------------------------------------------------------------<br>_______________________________________________<br>gradsusr mailing list<br><a href="mailto:gradsusr@gradsusr.org">gradsusr@gradsusr.org</a><br>http://gradsusr.org/mailman/listinfo/gradsusr<br></div></blockquote></div><br><div>
<span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; font-size: medium; "><span class="Apple-style-span" style="border-collapse: separate; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; -webkit-text-decorations-in-effect: none; text-indent: 0px; -webkit-text-size-adjust: auto; text-transform: none; orphans: 2; white-space: normal; widows: 2; word-spacing: 0px; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><span class="Apple-style-span" style="border-collapse: separate; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; -webkit-text-decorations-in-effect: none; text-indent: 0px; -webkit-text-size-adjust: auto; text-transform: none; orphans: 2; white-space: normal; widows: 2; word-spacing: 0px; "><span class="Apple-style-span" style="border-collapse: separate; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; -webkit-text-decorations-in-effect: none; text-indent: 0px; -webkit-text-size-adjust: auto; text-transform: none; orphans: 2; white-space: normal; widows: 2; word-spacing: 0px; "><div>--</div><div>Jennifer M. Adams<br>Center for Ocean-Land-Atmosphere Studies (COLA)<br>111 Research Hall, Mail Stop 2B3<br>George Mason University<br>4400 University Drive<br>Fairfax, VA 22030 <br><br></div><div><br class="khtml-block-placeholder"></div><br class="Apple-interchange-newline"></span></span></div></span></span><br class="Apple-interchange-newline">
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