[gradsusr] HDF5 control file help
Jennifer M Adams
jadams21 at gmu.edu
Thu Dec 10 07:59:48 EST 2015
Hi, Joyce —
The first thing to try is set up aliases for those variable names, which are not GrADS-compliant. Something like this:
Grid/precipitation=>p 0 y,x precipitation
Grid/probabilityLiquidPrecipitation=>lp 0 y,x liquid precip
—Jennifer
On Dec 9, 2015, at 7:06 PM, Meyerson, Joyce <hobo at atmos.ucla.edu<mailto:hobo at atmos.ucla.edu>> wrote:
Hi Users,
I have a hdf5 data file from NASA's Global Precipitation Measurement project and I'm having trouble writing the control file. I don't know what I'm doing wrong. Any help would be greatly appreciated. The error I'm getting is
open test.ctl
Open Error: Invalid variable record
--> The invalid description file record is:
--> Grid/precipitation 0 y,x precipitation
DSET ^3B-MO-CA-180W50N180E20N.MS.MRG.3IMERG.20150101-S000000-E235959.000001.V03D.HDF5
OPTIONS template
DTYPE hdf5_grid
TITLE GPM precip
UNDEF -999.0 _FillValue
XDEF 3600 linear -180 0.1
YDEF 300 linear -20 0.1
ZDEF 1 levels 1000
TDEF 1 linear 01dec2015 1dy
VARS 2
Grid/precipitation 0 y,x precipitation
Grid/probabilityLiquidPrecipitation 0 y,x liquid precip
ENDVARS
Here's the file contents of
h5dump -n 3B-MO-CA-180W50N180E20N.MS.MRG.3IMERG.20150101-S000000-E235959.000001.V03D.HDF5
HDF5 "3B-MO-CA-180W50N180E20N.MS.MRG.3IMERG.20150101-S000000-E235959.000001.V03D.HDF5" {
FILE_CONTENTS {
group /
group /Grid
dataset /Grid/gaugeRelativeWeighting
dataset /Grid/lat
dataset /Grid/lon
dataset /Grid/precipitation
dataset /Grid/probabilityLiquidPrecipitation
dataset /Grid/randomError
}
}
and the dataset
h5dump -H -d/Grid/precipitation 3B-MO-CA-180W50N180E20N.MS.MRG.3IMERG.20150101-S000000-E235959.000001.V03D.HDF5
HDF5 "3B-MO-CA-180W50N180E20N.MS.MRG.3IMERG.20150101-S000000-E235959.000001.V03D.HDF5" {
DATASET "/Grid/precipitation" {
DATATYPE H5T_IEEE_F32LE
DATASPACE SIMPLE { ( 3600, 300 ) / ( 3600, 300 ) }
ATTRIBUTE "CodeMissingValue" {
DATATYPE H5T_STRING {
STRSIZE 8;
STRPAD H5T_STR_NULLTERM;
CSET H5T_CSET_ASCII;
CTYPE H5T_C_S1;
}
DATASPACE SCALAR
}
ATTRIBUTE "DIMENSION_LIST" {
DATATYPE H5T_VLEN { H5T_REFERENCE}
DATASPACE SIMPLE { ( 2 ) / ( 2 ) }
}
ATTRIBUTE "DimensionNames" {
DATATYPE H5T_STRING {
STRSIZE 8;
STRPAD H5T_STR_NULLTERM;
CSET H5T_CSET_ASCII;
CTYPE H5T_C_S1;
}
DATASPACE SCALAR
}
ATTRIBUTE "Units" {
DATATYPE H5T_STRING {
STRSIZE 6;
STRPAD H5T_STR_NULLTERM;
CSET H5T_CSET_ASCII;
CTYPE H5T_C_S1;
}
DATASPACE SCALAR
}
ATTRIBUTE "_FillValue" {
DATATYPE H5T_IEEE_F32LE
DATASPACE SCALAR
}
ATTRIBUTE "coordinates" {
DATATYPE H5T_STRING {
STRSIZE 8;
STRPAD H5T_STR_NULLTERM;
CSET H5T_CSET_ASCII;
CTYPE H5T_C_S1;
}
DATASPACE SCALAR
}
ATTRIBUTE "units" {
DATATYPE H5T_STRING {
STRSIZE 6;
STRPAD H5T_STR_NULLTERM;
CSET H5T_CSET_ASCII;
CTYPE H5T_C_S1;
}
DATASPACE SCALAR
}
}
}
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