[gradsusr] How to combine the different nc files to calculate the mean and SD? Thanks.
2008 duan
duan.scut.cn at gmail.com
Tue Jan 8 21:27:19 EST 2013
Dear Mr. Kishore,
Although I tried many times, I still do not solve the problem. I
want to ask you some questions. Thanks.
1)What is your operating system. Because mine is Win-64+Cygwin.
2)Is need to put the netcdf-4.2.1.1 into the CDO-1.5.9 directory?
3) Sometimes, the configuration was OK and I found Checking for
netcdf support ....yes. And then input make and make install to finish the
installation. But the result was also not library support the NC file.
Thank you very much!
Regards,
Duan
On Tue, Jan 8, 2013 at 2:47 PM, Kishore Babu <kishoreragi at gmail.com> wrote:
> In my case. I have zlib, szip and szip enabled hdf5 already installed in
> my desktop so I have installed with hdf5. I am not much technically sound,
> but we may need hdf5.
>
> I explain what i have done during that time.
>
> step-1: Install zlib
> step-2: install szip
> step-3: install hdf5 with szip
> step-4: install netcdf with hdf5
> step-5: install CDO with netcdf, hdf5, szip, zlib
>
> I did not use grib_api and jasper ....
>
> I don't know much about the technicality but, it worked for me...
>
> Regards,
>
> Kishore
>
>
> On Tue, Jan 8, 2013 at 10:51 AM, Muhammad Yunus Ahmad Mazuki <
> ukm.yunus at gmail.com> wrote:
>
>> Which netcdf library is needed to be downloaded and used? If say I use
>> Ubuntu 12.04 LTS, do I get the Fortran, C or Java library?
>> Yunus
>>
>>
>> On Tue, Jan 8, 2013 at 1:09 PM, 2008 duan <duan.scut.cn at gmail.com> wrote:
>>
>>> Dear Kishore,
>>>
>>> I installed it again according to the guidance.
>>> [image: Inline image 1]
>>>
>>> But errors are the same. When I figure like this "./configure
>>> --with-netcdf=<netCDF root directory>" or" ./configure", it worked and said
>>> configure is finished. But when I merged the different NC files, the errors
>>> still happened.
>>>
>>> So, did you how to solve it? Thanks a lot!
>>>
>>> Best wishes,
>>>
>>> Duan
>>>
>>>
>>> On Tue, Jan 8, 2013 at 1:43 PM, Kishore Babu <kishoreragi at gmail.com>wrote:
>>>
>>>> hi,
>>>>
>>>> I also faced that problem at the beginning. Just install CDO from
>>>> source by following the instruction given there.
>>>>
>>>> Cheers,
>>>>
>>>> Kishore
>>>>
>>>>
>>>> On Tue, Jan 8, 2013 at 9:25 AM, 2008 duan <duan.scut.cn at gmail.com>wrote:
>>>>
>>>>> Hi,Thank you everyone!
>>>>>
>>>>> But I faced another problem as the following figure
>>>>> [image: Inline image 1]
>>>>>
>>>>> Unsupported file type?? I have already installed the "libs4cdo-0.0.10<https://code.zmaw.de/versions/show/140>",
>>>>> and then installed the CDO. Of course, I have configured everything
>>>>> according to the manual as follows.
>>>>> I [image: Inline image 2]
>>>>>
>>>>> Do I need to put the libs4cdo-0.0.10<https://code.zmaw.de/versions/show/140> into
>>>>> the cdo-1.5.9? I thought it already supports the NC files.
>>>>>
>>>>> So, how can I solve this problem. Thank you very much!
>>>>>
>>>>> Best regards!
>>>>>
>>>>> On Tue, Jan 8, 2013 at 12:19 AM, Serge Claudio Rafanoharana <
>>>>> rafanoharana at gmail.com> wrote:
>>>>>
>>>>>> Hi,
>>>>>>
>>>>>> Please refer to the CDO manual (attached). You can have a look at
>>>>>> mergetime (mentioned by Kishore), cdo info or cdo infon (will give you min,
>>>>>> mean, max, ...) and the std also is there.
>>>>>>
>>>>>> Hope it can help.
>>>>>>
>>>>>> Cheers,
>>>>>> Serge
>>>>>>
>>>>>>
>>>>>>
>>>>>> On Mon, Jan 7, 2013 at 8:54 PM, Kishore Babu <kishoreragi at gmail.com>wrote:
>>>>>>
>>>>>>> Hi,
>>>>>>>
>>>>>>> you can play very easily with nc file with simple handling cdo
>>>>>>> commands..
>>>>>>>
>>>>>>> As per your question, you want to add many files into a single file
>>>>>>> containing same variable for a longer time.
>>>>>>>
>>>>>>> I hope that you have installed cdo. If yes, just invoke the
>>>>>>> following command ...
>>>>>>>
>>>>>>> cdo mergetime input1.nc input2.nc input3.nc ........... output.nc
>>>>>>>
>>>>>>> That's it! you are done !!! your output file contains all the time
>>>>>>> you need..
>>>>>>>
>>>>>>> Cheers,
>>>>>>>
>>>>>>> Kishore
>>>>>>>
>>>>>>>
>>>>>>> On Mon, Jan 7, 2013 at 5:49 PM, 2008 duan <duan.scut.cn at gmail.com>wrote:
>>>>>>>
>>>>>>>> Dear Everyone,
>>>>>>>>
>>>>>>>> Happy New Year!
>>>>>>>>
>>>>>>>> Now I have a question to ask you. Thank you very much!
>>>>>>>>
>>>>>>>> 'reinit'
>>>>>>>>
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1981.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1982.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1983.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1984.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1985.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1986.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1987.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1988.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1989.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1990.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1991.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1992.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1993.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1994.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1995.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1996.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1997.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1998.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.1999.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.2000.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.2001.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.2002.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.2003.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.2004.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.2005.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.2006.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.2007.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.2008.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.2009.nc'
>>>>>>>> 'sdfopen D:\TDDOWNLOAD\hgt.2010.nc'
>>>>>>>> 'set mpdset hires'
>>>>>>>> yr=1981
>>>>>>>> while(yr<=2010)
>>>>>>>>
>>>>>>>> *******************************************************
>>>>>>>> *Standard deviation will be caculated
>>>>>>>> 'set lat 0 50.5'
>>>>>>>> 'set lon 119.5 179.5'
>>>>>>>>
>>>>>>>>
>>>>>>>> 'define mean=ave(hgt.'yr',time=01JAN'yr',time=31DEC'yr')'
>>>>>>>> 'define sd=sqrt(ave(pow(hgt.'yr'-mean,2),time=01JAN'yr',time=31DEC'yr'))'
>>>>>>>>
>>>>>>>> *********************************************************
>>>>>>>> *This is a skill to plot a shaded map with contour on it
>>>>>>>> 'set grads off'
>>>>>>>> 'set gxout shaded'
>>>>>>>> 'd sd'
>>>>>>>> 'cbarn'
>>>>>>>> 'set gxout contour'
>>>>>>>> 'set cthick 5'
>>>>>>>> 'd sd'
>>>>>>>> 'draw title Standard Deviation of 'yr' '
>>>>>>>> 'printim D:\TDDOWNLOAD\'yr'.png x1000 y800 white'
>>>>>>>> 'c'
>>>>>>>> yr=yr+1
>>>>>>>> endwhile
>>>>>>>> ;
>>>>>>>>
>>>>>>>> I donot know where are the wrongs. I want to figure out the mean and SD between 1981 to 2010.
>>>>>>>>
>>>>>>>> I want to ask how to combine the files containing hgt.1981.nc to hgt.2010.nc. If it is a single file, I think it is easy to figure out the mean and SD.
>>>>>>>>
>>>>>>>> Thank you everyone!
>>>>>>>>
>>>>>>>>
>>>>>>>> --
>>>>>>>> Weili Duan
>>>>>>>> Disaster Prevention Research Institute (DPRI), Kyoto University,
>>>>>>>> Uji, Kyoto 611-0011, Japan
>>>>>>>> TEL: +81-774-38-4131 FAX: +81-774-38-4130
>>>>>>>> E-mail: duan.scut.cn at gmail.com
>>>>>>>> duanwl1986 at flood.dpri.kyoto-u.ac.jp<dyuan.weiri.88r at st.kyoto-u.ac.jp><dyuan.weiri.88r at st.kyoto-u.ac.jp>
>>>>>>>>
>>>>>>>> _______________________________________________
>>>>>>>> gradsusr mailing list
>>>>>>>> gradsusr at gradsusr.org
>>>>>>>> http://gradsusr.org/mailman/listinfo/gradsusr
>>>>>>>>
>>>>>>>>
>>>>>>>
>>>>>>> _______________________________________________
>>>>>>> gradsusr mailing list
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>>>>>>>
>>>>>>>
>>>>>>
>>>>>>
>>>>>> --
>>>>>> Serge
>>>>>> _______________________________________________
>>>>>> gradsusr mailing list
>>>>>> gradsusr at gradsusr.org
>>>>>> http://gradsusr.org/mailman/listinfo/gradsusr
>>>>>>
>>>>>>
>>>>>
>>>>>
>>>>> --
>>>>> Weili Duan
>>>>> Disaster Prevention Research Institute (DPRI), Kyoto University, Uji,
>>>>> Kyoto 611-0011, Japan
>>>>> TEL: +81-774-38-4131 FAX: +81-774-38-4130
>>>>> E-mail: duan.scut.cn at gmail.com
>>>>> duanwl1986 at flood.dpri.kyoto-u.ac.jp<dyuan.weiri.88r at st.kyoto-u.ac.jp><dyuan.weiri.88r at st.kyoto-u.ac.jp>
>>>>>
>>>>> _______________________________________________
>>>>> gradsusr mailing list
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>>>>>
>>>>>
>>>>
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>>>>
>>>
>>>
>>> --
>>> Weili Duan
>>> Disaster Prevention Research Institute (DPRI), Kyoto University, Uji,
>>> Kyoto 611-0011, Japan
>>> TEL: +81-774-38-4131 FAX: +81-774-38-4130
>>> E-mail: duan.scut.cn at gmail.com
>>> duanwl1986 at flood.dpri.kyoto-u.ac.jp<dyuan.weiri.88r at st.kyoto-u.ac.jp><dyuan.weiri.88r at st.kyoto-u.ac.jp>
>>>
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>>>
>>
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>
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--
Weili Duan
TAKARA & YAMASHIKI Lab, E314D, Disaster Prevention Research Institute
(DPRI),
Kyoto University, Uji, Kyoto 611-0011, Japan
TEL: +81-774-38-4131 FAX: +81-774-38-4130
E-mail: duan.scut.cn at gmail.com
duanwl1986 at flood.dpri.kyoto-u.ac.jp<dyuan.weiri.88r at st.kyoto-u.ac.jp><dyuan.weiri.88r at st.kyoto-u.ac.jp>
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