[gradsusr] OpenGrADS 2.01.oga.1 Bundle for Linux - Ubuntu issues
Kevin M Levey
klevey at customweather.com
Tue Nov 1 17:20:27 EDT 2011
Hi Jennifer,
Thanks for the heads up on the draw shp - that problem disappeared, however, the original issue persists - when trying to run the script a 2nd time, grads hangs - I tested on both the 32-bit GRADS 2.0.1 (John Huddleston) and Arlindo's opengrads version.
cheers
Kevin
On Nov 1, 2011, at 11/01/11 - 12:51 PM, Jennifer Adams wrote:
> "shp_lines" is part of a deprecated shapefile interface and should not be in any new build of opengrads. Take it out of your script and use the 'draw sip' command instead. Remove the call to gxyat as well. Then try again and see if it still hangs. --Jennifer
>
>
> On Nov 1, 2011, at 2:27 PM, Kevin M Levey wrote:
>
>> TUE 01NOV11: 1035PDT
>>
>> Hi Arlindo
>>
>> OK - I've nailed down the issue a little more with further testing of various other scripts. It appears the script WILL successfully run the first time form the command line, however, if you try running it a second time that is when 2.0.1.oga.1 simply freezes. I've attached a simple script that opens up the 06UTC GFS template CTL file and produces the expected MAX temp for 01H00 CDT today. It runs just fine in 2.0.a9.oga.1. It runs the first time in 2.0.1.oga.1, but there is another issue too with your "shp_lines" routine:
>>
>> <Screen Shot 2011-11-01 at 10.21.01 AM.png>
>>
>> I've attached the script for you to look at.
>>
>> Here is screen output of a session showing you exactly what happens:
>>
>> weather:fweather1 /prod/custom/Input/modelplots/GRADS/scripts > g2
>>
>> Welcome to the OpenGrADS Bundle Distribution
>> --------------------------------------------
>>
>> For additional information enter "grads -h".
>>
>> Starting "/usr/local/src/grads-2.0.1.oga.1/Contents/Linux/Versions/2.0.1.oga.1/x86_64/grads " ...
>>
>>
>> Grid Analysis and Display System (GrADS) Version 2.0.1.oga.1
>> Copyright (c) 1988-2011 by Brian Doty and the
>> Institute for Global Environment and Society (IGES)
>> GrADS comes with ABSOLUTELY NO WARRANTY
>> See file COPYRIGHT for more information
>>
>> Config: v2.0.1.oga.1 little-endian readline printim grib2 netcdf hdf4-sds hdf5 opendap-grids,stn athena geotiff shapefile
>> Issue 'q config' command for more detailed configuration information
>> Loading User Defined Extensions table </usr/local/grads2/Linux/Versions/2.0.1.oga.1/x86_64/gex/udxt> ... ok.
>> Landscape mode? ('n' for portrait):
>> GX Package Initialization: Size = 11 8.5
>> ga-> test_GFS.gs
>> No hardcopy metafile open
>> All files closed; all defined objects released;
>> All GrADS attributes have been reinitialized
>> Using shapefile /var/data/lookup/shape/admin00
>> Shapefile Type: Polygon # of Shapes: 2606
>> File Bounds: ( -180.000, -90.000 ) to ( 180.000, 83.624 )
>> Done shapefile /var/data/lookup/shape/admin00
>> ga-> test_GFS.gs
>> No hardcopy metafile open
>> All files closed; all defined objects released;
>> All GrADS attributes have been reinitialized
>>
>> This is the point at which it merely hangs. This behavior is exactly the same using the 32-bit Ubuntu version of GRADS 2.0.1 that John Huddleston suggested I use to test, so this may not be an issue of your build, but in the general GRADS/COLA build. Likewise with your i686 build. It makes no difference what script I run, always the same result - hangs. Although, there is an issue with your "shp_lines" routine as you have seen above.
>>
>> Cheers
>> Kevin
>>
>> <test_GFS.gs>
>>
>>
>>
>> On Nov 1, 2011, at 11/01/11 - 5:29 AM, Arlindo da Silva wrote:
>>
>>> On Mon, Oct 31, 2011 at 9:36 PM, Kevin M Levey <klevey at customweather.com> wrote:
>>> MON 31OCT11: 1830PDT
>>>
>>> Hi all and Arlindo
>>>
>>> Not sure if anyone else has upgraded to this latest version on an Ubuntu system. I upgraded our dev/test machine and other than having to add a missing library, the upgrade seemed fine. It loaded up just fine. However, when running a simple test script which I always use to ensure everything works as it should, opengrads simply froze. Has anyone else had this problem with this latest version? I had to revert back to 2.0.a9.oga.1 and my script worked just fine.
>>>
>>>
>>> I need just a bit more information in order to diagnose the problem. Can you share the test script with me? Can you tell the specif line where it is hanging? Have you tried the i686 build to rule out that this is not a x86_64 specific issue? Every binary we put out passes our unit tests, but any such collection of tests only covers a limitted set of features.
>>>
>>> Arlindo
>>>
>>>
>>> All our backend servers are set up identically to our dev/test server:
>>>
>>> Linux cumulonimbus 2.6.32-33-server #72-Ubuntu SMP Fri Jul 29 21:21:55 UTC 2011 x86_64 GNU/Linux
>>> Ubuntu 10.04.3 LTS
>>>
>>> weather:cumulonimbus ~ > uname -m
>>> x86_64
>>>
>>> weather:cumulonimbus ~ > ldd --version
>>> ldd (Ubuntu EGLIBC 2.11.1-0ubuntu7.8) 2.11.1
>>> Copyright (C) 2009 Free Software Foundation, Inc.
>>> This is free software; see the source for copying conditions. There is NO
>>> warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
>>> Written by Roland McGrath and Ulrich Drepper.
>>>
>>> Arlindo, any ideas why this is happening? This is the first time I've ever had an issue with any of your distributions.
>>>
>>> Thanks
>>>
>>> Regards,
>>>
>>> Kevin M Levey, MSc in Oceans and Atmospheric Sciences (University of Cape Town)
>>> Vice President of Operations
>>> CustomWeather, Inc.
>>> San Francisco, California, USA
>>>
>>> "Taking the World by Storm!"
>>>
>>> http://www.customweather.com
>>> http://www.myforecast.com
>>> http://www.1stweather.com
>>>
>>> cell: 415-794-0411
>>> work: 415-777-3566
>>> email: klevey at customweather.com
>>>
>>> On Oct 29, 2011, at 10/29/11 - 1:45 PM, Arlindo da Silva wrote:
>>>
>>>> Dear GrADS Linux Users,
>>>>
>>>> This message is intended for those users downloading the OpenGrADS bundle for Linux. As of this writing there are 2 binary tarballs at sf.net:
>>>>
>>>> - 32-bit version (i686):
>>>>
>>>> grads-2.0.1.oga.1-bundle-i686-glibc2.5-linux-gnu.tar.gz
>>>>
>>>> - 64-bit version (x86_64):
>>>>
>>>> grads-2.0.1.oga.1-bundle-x86_64-glibc2.5-linux-gnu.tar.gz
>>>>
>>>> (You can determine if your machine is 32 or 64 bits with the uname command:
>>>>
>>>> % uname -m
>>>> )
>>>>
>>>> Now, the i686 binary will usually work on a x86_64 machine, but the native build will be a bit faster.
>>>>
>>>> Notice that we do not label the opengrads binary tarball with the name of Linux distribution where we built it on. The reason is that these (statically linked) binaries will usually work on a number of different Linux distributions. (The usual error message saying that a "libWhatever.so" cannot be found is easily fixed in the opengrads builds; see the Troubleshooting section of the INSTALL file.) The main factor determining whether a binary will work or not is the version of the GNU C Library (glibc). You can find the glibc version on your computer with the ldd command:
>>>>
>>>> % ldd --version
>>>>
>>>> The opengrads binaries for now on will show its own version of glibc in the file name. Usually, if your linux installation matches the glibc of the opengrads binaries (or if it is newer) you should be fine. If you have an older llinux distribution with a previous version of glibc there is a very good chance that the binaries will not work.
>>>>
>>>> At this point in time, 2.5 is the older version of glibc I can build for; however other people in this list may have older hardware available and be kind enough to contribute builds. Otherwise, If you have an older version of glibc building from sources (or upgrading your OS) may be your best option. (Or else, run a previous version of grads).
>>>>
>>>> Good Luck,
>>>>
>>>> Arlindo
>>>>
>>>> --
>>>> Arlindo da Silva
>>>> dasilva at alum.mit.edu
>>>> _______________________________________________
>>>> gradsusr mailing list
>>>> gradsusr at gradsusr.org
>>>> http://gradsusr.org/mailman/listinfo/gradsusr
>>>
>>>
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>>>
>>>
>>> --
>>> Arlindo da Silva
>>> dasilva at alum.mit.edu
>>> _______________________________________________
>>> gradsusr mailing list
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>>> http://gradsusr.org/mailman/listinfo/gradsusr
>>
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>
> --
> Jennifer M. Adams
> IGES/COLA
> 4041 Powder Mill Road, Suite 302
> Calverton, MD 20705
> jma at cola.iges.org
>
>
>
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